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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000028330

Domain assignment for ENSMODP00000028330 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000028330
Domain Number 1 Region: 841-898
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.48e-26
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 2 Region: 589-646
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.58e-25
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 3 Region: 785-842
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.72e-25
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 4 Region: 392-449
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.86e-25
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 5 Region: 448-505
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.34e-24
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 6 Region: 168-225
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.64e-24
Family Classic zinc finger, C2H2 0.007
Further Details:      
 
Domain Number 7 Region: 673-730
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.04e-24
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 8 Region: 280-337
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.24e-24
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 9 Region: 112-169
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.15e-24
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 10 Region: 925-982
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.28e-24
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 11 Region: 224-281
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.86e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 12 Region: 729-786
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.94e-23
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 13 Region: 336-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.88e-23
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 14 Region: 510-562
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.54e-22
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 15 Region: 1-47
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.1e-20
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 16 Region: 967-1019
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.99e-20
Family Classic zinc finger, C2H2 0.0079
Further Details:      
 
Domain Number 17 Region: 70-122
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.09e-20
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 18 Region: 636-668
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000124
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 19 Region: 552-584
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000608
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 20 Region: 888-920
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000022
Family Classic zinc finger, C2H2 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000028330   Gene: ENSMODG00000023095   Transcript: ENSMODT00000029912
Sequence length 1023
Comment pep:novel chromosome:BROADO5:2:539417876:539461339:1 gene:ENSMODG00000023095 transcript:ENSMODT00000029912 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
QESVTFEDVAVEFTWEEWRHLDPAQRALHRNVMLENYENLVSIEKSLAEDQILPCIRKVR
KERNISYRTHTGEKPFECNECGKAFSWKESLITHQSTHTGEKPFECNECRKTFSVRQSLI
KHQRVHTGEKPFQCNECGKAYRWKGHLVYHQRTHTGEKPFECNECGKTFSHKGRLIIHQR
THTGEKPFECKVCGKAFSQKVNLITHQSIHTGEKPFQCNDCGKTFSVRQSLIKHQRTHTG
EKPFQCNECGKAFPWKGHLVYHQRTHTGEKPFQCNECQKTFSQKKRLIIHQRTHTGKKPF
QCNECGKAFNQKESLHIHQRIHTGEKPFQCNECGKTFSVRQSLIKHQRIHTGEKAFQCNE
CGRAFSWKGDLVYHLRTHSGAKPFECNECGKTFSHKKRLIIHQRTHTGEKPFQCNECGKT
FNVRGNLTRHQRTHTGEKPFECNECGKTFSSKTNLITHQRIHTGVKPFKCNECGKAFSKK
GQLVDHQRIHTGEKPLECSECGKAFRFPSTALSVHQRIHTGEKPYECNHCGKTFKERASL
TVHQRIHTGEKPFECNLCRKAFIRRTRLTVHQRIHTGEKGYECNQCGKTFTRKSSLTVHQ
RIHTGETPYECNQCGKAFTHRTSFTVHQRIHTGEKPYECNQCGKAFRCRMNMVKHQSIHT
GEKPYECDQCGKAFTQKSGLIIHQKIHTGETPYECNQCGKAFRHRYRLNLHQRIHTGEKP
YECNQCEKAFTDKARFTVHQRIHTGEKPFECNLCGKAFRSRNSMVKHQSIHTGEKPYECD
QCGKAFTQKSGLIIHQRIHTGETPFECNQCGKAFRLRYLLNLHQRIHTGEKPYECNQCGK
AFTDRTSLNLHQRIHTGEKPYGCNQCGKAFTHRTNLTIHQRIHTGEKPYECNQCGKAFRC
RKSMVTHQSVHTGEKPHECDQCGKAFTHRTNLTVHQRIHTGETPFECNQCGKAFRRRFSL
KVHQRIHTGETPFECNQCGKAFIDRSNFTVHQRIHTGVKPHECNQCGKTFIDRSSLTVHQ
RIH
Download sequence
Identical sequences F7FPS3
ENSMODP00000028330 ENSMODP00000028330

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.