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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000028402

Domain assignment for ENSMODP00000028402 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000028402
Domain Number 1 Region: 744-801
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.58e-26
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 2 Region: 800-857
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1e-25
Family Classic zinc finger, C2H2 0.0028
Further Details:      
 
Domain Number 3 Region: 349-406
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.21e-25
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 4 Region: 461-518
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.72e-25
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 5 Region: 293-350
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9e-25
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 6 Region: 573-630
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.69e-24
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 7 Region: 693-745
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.03e-24
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 8 Region: 406-462
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.48e-24
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 9 Region: 517-574
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.67e-24
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 10 Region: 629-686
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.43e-23
Family Classic zinc finger, C2H2 0.008
Further Details:      
 
Domain Number 11 Region: 237-294
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.62e-23
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 12 Region: 181-238
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.08e-22
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 13 Region: 124-181
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.76e-22
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 14 Region: 82-134
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.9e-22
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 15 Region: 846-898
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.98e-21
Family Classic zinc finger, C2H2 0.0033
Further Details:      
 
Domain Number 16 Region: 2-48
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.7e-16
Family KRAB domain (Kruppel-associated box) 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000028402   Gene: ENSMODG00000023102   Transcript: ENSMODT00000029984
Sequence length 900
Comment pep:novel chromosome:BROADO5:2:538198109:538264001:-1 gene:ENSMODG00000023102 transcript:ENSMODT00000029984 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
EVVTFQDVAVDFTRGEWRLLSPPQKELYREVMLENARNLLSVVFEYSKYILVLFIKITLE
QREMKKTEKPSQQLPFSTPRIHTGEKPYECKQCGKTFSWNSALAAHQRIHTGEKPYECKQ
CGKTFSQISHLTVHQRIHTGEKPYECKQCGKTFSQSSHFSGHLRIHSGEKPYECKQYGRP
FKHNYSLALHQRIHSGEKPHECKQCGKKFIYSYSLTAHQRRIHTGEKPYECKQCGKTFNR
SCSLGIHQKIHTGEKPYECKQCRKTFRKISSLVRHQRIHSGEKPYECKQCGKTFRNISSL
GRHQRIHTGEKPYECKQCGKTFSRTCSLAQHQRIHTGEKPYECKECGKTFRLSSVLAQHQ
NIHTGEKPYECKQCGKTFSQRSHLDNHQRIHTGEKPYECKQCGKTYRGSSYLAIHQRTHT
GEKPYECKECGKTFRNSSSVAVHQRIHSGEKPYECKQCGKTFRNSSSLGRHQRVHTGEKP
YDCKQCGKTFSRSCSLAQHQRIHTGEKPYECKECGKTFRLSSSLAQHQNIHTGEKTYECN
QCGKTFYGSYYLAIHQRIHTGEKPYECKQCGKAFSQSSSLSKHQRIHSGEKPYECKECGK
TFRSHPSLVYHRRIHTGEKPYECKQCGKAFRGSSYLLIHQRTHTGEKAYECKQCGKEFRG
ILSLAVHQRIHTGEKPYECKQCGKTFSVPEGYSDLAQHQIIHTGEKPYECKQCGKTFRWS
SVLAQHQRIHTGEKPYECKQCGKTFTQSSYLAQHQRIHTGEKPYECKKCGKTFRLRSDLA
VHQRVHTGEKPYECKQCGKTFNQRSHLTVHQRIHSGEKPYECKKCGKTFSQSSYLAQHQR
IHTGEKPYECKQCGKTFSQSSYLAEHQRVHTGEKPYECKQCGKTFSQRSHLTVHQRIHSG
Download sequence
Identical sequences F7BLS2
ENSMODP00000028402 ENSMODP00000028402

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.