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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000030861

Domain assignment for ENSMODP00000030861 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000030861
Domain Number 1 Region: 818-875
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.15e-26
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 2 Region: 594-651
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.05e-25
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 3 Region: 650-707
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.66e-25
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 4 Region: 986-1043
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.97e-25
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 5 Region: 930-987
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.57e-25
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 6 Region: 309-365
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.36e-25
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 7 Region: 448-505
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.42e-25
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 8 Region: 1154-1211
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.03e-24
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 9 Region: 1042-1099
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.32e-24
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 10 Region: 364-421
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.35e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 11 Region: 706-763
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.72e-24
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 12 Region: 762-819
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6e-24
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 13 Region: 874-931
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.44e-23
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 14 Region: 1098-1155
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.48e-23
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 15 Region: 252-309
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.49e-22
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 16 Region: 100-160
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.01e-21
Family KRAB domain (Kruppel-associated box) 0.0012
Further Details:      
 
Domain Number 17 Region: 533-595
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.09e-20
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 18 Region: 1196-1248
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000726
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 19 Region: 199-252
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000148
Family Classic zinc finger, C2H2 0.02
Further Details:      
 
Domain Number 20 Region: 411-443
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000559
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 21 Region: 495-527
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000929
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000030861   Gene: ENSMODG00000023643   Transcript: ENSMODT00000032432
Sequence length 1253
Comment pep:novel chromosome:BROADO5:3:502305507:502561971:1 gene:ENSMODG00000023643 transcript:ENSMODT00000032432 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MPRAVPSRPPPASHKAGMLRPRGKRSAPSCVRREKSWEVGTPEAPAAFSVFPKARRPERP
KRQDQEKMEEFHQMDSLGLLCCLYREPGVSGMALERDRLPAQEAVTFKEVAVDFTQEEWR
LLSPPQKELYKEVMLENARNLLSVGLPGTPEDMISSLEQREAPWILEQEGLRNCCPGLQK
FMSDGSNKFAFREFCVVPQNSSHIEHQRMHTEEKSSEINECQKTFMNRTSLARHQRIHTT
GRPFECKSGRKTYRVSSSLAVHQRIPTGEKPYECKHCGKTFSHSLSLVEHQRTHTGEKPY
ECKHCRKPFTNSSNLAVHQRIHTGEKPYKCKQCGKTFIQRSHFAAHQRIHTGEKPYDCKQ
CGKTFSQSYSLVVHQRIHTGEKPYECKQCGKTFTNNSNLAVHQRIHTGEKPYECKLCEMT
FSESSSLSVHQRIHTGEKPYECKRCEKTFNRISSLVQHQRTHTGEKPYECKQCEKTFNSN
SSLAAHQRIHTGEKPYDCKQCGKTFSRRDQLAVHQRTHTGEKPCECKQCGKTFNSNSSLA
HHERIHTGEKPFECKHPYDCKQCGKAFSCSSTLAVHQRIHTGEKPYECKQCGKTFRLSST
LATHERIHTGEKPYECQQCGKTFSRSSSLAEHQRIHTGEKPYECQQCGKAFTCSSALTVH
QRIHTGEKPYECKQCGKTFSCNSALAVHLRIHTGEKPYECQQCGKAFICSSALAVHRRIH
TGENPYECQQCGKAFICSSTLAVHQRVHTGEKPYECQQCGKAFTCSSSLAVHQRIHTGEK
PYECKHCEKTFRFSSTLAVHKRIHTGEKPYECQQCGKAFSRSSHLALHQRIHTGEKPYEC
KQCGKAFSCSSALAAHQRIHTGEKPYECQQCGKAFSCNSALAVHRRIHTGEKPYECKQCG
KGFICSSALAVHRRIHTGENPYECKQCGKAFICSSTLAVHQRVHTGEKPYECQQCGKAFS
RSSHLAVHQRIHTGEKPYECPQCRKAFICSSALAEHQRTHTGEKPYECKQCGKAFNYSSH
LAVHQRIHTGEKPYECKWCGKTFRLSSQLAVHERIHTGEKPYKCKQCGKTFSRSSSLAEH
QRIHTGVKPYECKHCGKTFNWSSHLAVHERIHTGEKPYECEQCRKTFRLSSHLAVHERIH
TGEKPYECKQCKKTFSRSSHLAVHQRTHTGEKPYECQQCRKTFSRSSSLAEHKRIHTGEK
PYECQQCGKTFRLSSQLAVHQRIHVGEKHYEYKQCRKALTKNYCFAVHQEIHT
Download sequence
Identical sequences F7DUH7
ENSMODP00000030861 ENSMODP00000030861

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.