SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000000674 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000000674
Domain Number 1 Region: 24-104
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000000497
Family Canonical RBD 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000000674   Gene: ENSMODG00000000559   Transcript: ENSMODT00000000689
Sequence length 363
Comment pep:known_by_projection chromosome:BROADO5:2:21119412:21135406:-1 gene:ENSMODG00000000559 transcript:ENSMODT00000000689 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSTPTVVPSAPGPGPGPSAGGGPGTEVIQVTNVSSASSEQMRTLFGFLGKIDELRLFPPS
DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPA
NAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPALDPALAALGLPGANLNSQSLAADQLL
KLMSTVISRLTHVPEGFFSPILKSDPSRKEMEEAMKKVREAHSLFWAPIDPDKKEEKRRH
SRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRGRRSHSRERGRRSRSTS
KTRDKKKEEKEKKRSKTPPKSYSTARRSRSTSREKPPPRNSNGPPSPKKPPSPKKKLSPS
PPP
Download sequence
Identical sequences F6X514
ENSMODP00000000674 13616.ENSMODP00000000674 ENSMODP00000000674

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]