SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000004717 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000004717
Domain Number 1 Region: 114-204,246-327
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.3e-44
Family Canonical RBD 0.0000945
Further Details:      
 
Domain Number 2 Region: 16-109
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 8.55e-25
Family Canonical RBD 0.000062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000004717   Gene: ENSMODG00000003850   Transcript: ENSMODT00000004817
Sequence length 332
Comment pep:novel chromosome:BROADO5:X:55424314:55425874:-1 gene:ENSMODG00000003850 transcript:ENSMODT00000004817 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CSGSSSGPNPGSCSCPEDSGACSSDPKTNLIVNYLPQSMTQEEFYNLFATVGKIQSCKLV
RDRSTGQSLGYGFVNYVDPRDAEQAVCLLNRLQCPPKTIKVSFARPSSSSIRDANLYVSG
LPRNMMQKDLEQLFSPFGRIITSRILIDRVSGASRGVGFILFDKKSEAEEAIKALNGQKP
CGNRVPLIVKFAQHQTQRTPQGYLSQTSRFGQEGFFNMPYGVQNMAPPSYSGAPNMAGIT
YPGHTSSGWCIFVYNLSPDSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSY
NEAALAVASLNGYCLGGRVLQVSFKTNKIHKA
Download sequence
Identical sequences F7EBL5
ENSMODP00000004717

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]