SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000006354 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000006354
Domain Number 1 Region: 215-426
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 9.24e-55
Family Reprolysin-like 0.00099
Further Details:      
 
Domain Number 2 Region: 514-570
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000249
Family TSP-1 type 1 repeat 0.00053
Further Details:      
 
Domain Number 3 Region: 893-950
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000131
Family TSP-1 type 1 repeat 0.0074
Further Details:      
 
Domain Number 4 Region: 839-891
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000157
Family TSP-1 type 1 repeat 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000006354   Gene: ENSMODG00000005161   Transcript: ENSMODT00000006486
Sequence length 950
Comment pep:known_by_projection chromosome:BROADO5:4:280733903:280771209:1 gene:ENSMODG00000005161 transcript:ENSMODT00000006486 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLLLGILALVLAGGPACGSDPEQEIVVPIRLDPDINGRHYYRRGPEDSGDQRLIFQITAF
QEDFYLHLAPDAQFLAPAFATQHLGVFQARGSGGSPDLRRCFYSGDVNAERDSFAALSLC
GGLRGAFGYRGAEYVISPLPNVSAPEAQRNSQGAHLLQRRGAPGRPPGDPTSRCGVASGW
NPAILRALDPYKSLRAGSGESRSPRRAGRAKRFVSIPRYVETLVVADESMVKFHGADLEH
YLLTLLATAARLYRHPSILNPINIAVVKVLVLADRDKGPKVTGNAAMTLRNFCAWQKKLN
KVSDKHPEYWDTAILFTRQDLCGATTCDTLGMADVGTMCDPKRSCSVIEDDGLPSAFTTA
HELGHVFNMPHDNVKVCEEVFGKLRANHMMSPTLIQIDRANPWSACSAAIITDFLDSGHG
DCLLDQPSKPISLPEDLPGSSYTLNQQCELAFGVGSKPCPYMQYCTKLWCTGKAKGQMVC
QTRHFPWADGTGCGEGKFCLKGACVERHNISKYRVDGSWAKWEPYGPCSRTCGGGVQLAR
RECSNPAPANGGKYCEGVRVKYRSCNLEACPSSVSGKSFREEQCEAFNGYNHSTNRLTLT
MAWVPKYSGVSPRDKCKLICRASGTGYFYVLAPKVVDGTPCTPDSTSVCVQGKCIKAGCD
GNLGSKKKFDKCGVCGGDNKSCKRVTGLFTKPMHGYNFVVAIPAGASSIDIRQRGYQGLI
SDDNYLALKNGQGKYLLNGHFVVSAVERDLMVKGSLVRYSGTSTAVERLQASRPILEPLT
VEVLSVGKMTPPRIRYSFYLPKEPREDKSAYRKDSRGSSVLNNSVLSLSNQVEQSDNRPP
ARWVVGSWGSCSVSCGSGLQKRVVDCRGSPGQLAASACDTVQRPTETRPCGDPCPAWETG
AWSPCSKSCGRGFKRRPLKCVGHGGRLLTRDQCNLRRKPQELDFCTLRPC
Download sequence
Identical sequences F7E8C6
13616.ENSMODP00000006354 ENSMODP00000006354 XP_001365853.1.35504 ENSMODP00000006354

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]