SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000010612 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000010612
Domain Number 1 Region: 11-86
Classification Level Classification E-value
Superfamily PDZ domain-like 0.0000000256
Family PDZ domain 0.073
Further Details:      
 
Domain Number 2 Region: 94-180
Classification Level Classification E-value
Superfamily PDZ domain-like 0.00000216
Family PDZ domain 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000010612   Gene: ENSMODG00000024782   Transcript: ENSMODT00000010819
Sequence length 450
Comment pep:known_by_projection chromosome:BROADO5:4:180968767:181010547:1 gene:ENSMODG00000024782 transcript:ENSMODT00000010819 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLK
ANVEKPVKMLVYSSKTLELRETSVTPSNMWGGQGLLGVSIRFCSFDGANENVWHVLEVES
NSPAALAGLRPYSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITP
NSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMTNTPVTPLKDGFTEVQLSSVN
PSPVSPPGTTGIEQSLSGLSISSTPSAVTNVLSTGVPTVPLLPPKVNQTISSVPPVNPAA
TLPGLVPLPAGLPNLANLSNLNLPAPQLIPGAGLPEVMHPGLPPLPSLPPLNLSGITPLS
MPSEFLPSFPLVPEVSSATPELLSSLPPVGSLPSDPVSTARAEQTSSLPTDVPPLTSKAT
TVEDTANESITTSEKPVSMIAADTSASESP
Download sequence
Identical sequences F7DHB7
13616.ENSMODP00000010612 XP_001367823.1.35504 ENSMODP00000010612

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]