SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000013042 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000013042
Domain Number 1 Region: 342-388
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000314
Family TSP-1 type 1 repeat 0.00092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000013042   Gene: ENSMODG00000010405   Transcript: ENSMODT00000013280
Sequence length 853
Comment pep:known_by_projection chromosome:BROADO5:4:315227766:315248323:-1 gene:ENSMODG00000010405 transcript:ENSMODT00000013280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKQMLKDFSNLLLVVLCDYVLGEAEYIFLGQPDHVALSNKTVSVDFLYSDGNNATMRNVS
ILLLDASKNQTIATKHLLTNQFQGTLEFECFYFREAGDYWFILSPAKMDNSTRDSWQEKH
AFLKVEWPVFHIDFNQTSKATGDTLQVGLFTNQPLCSFTTDRPDILVELIFTNSISELKE
SRDQPLEIRISKRISLAPVQWIEFDCAPIGPQAYATVLLKLQDTSTVITSTGPIDLVQRF
GYKLVTLPELKCESLVDVMIVPPPCTFAQGMVTVYKDTTRHSGERLGWLAENIVPLGASK
TAFNCTLFAMGKNKYCFEFSFSSRSHFSSGENCMVIQRNIETWSLWQAWNPCSVTCGDGV
RDRRRTCLTSSPSKPGCVGTSTETSLCSLEECSSFNPSSPSPAQPKGPLKANNIVTVTGI
SLCLFIIIATVLITLWRKFGRPPKCSTPARHNSIHSPNFRKNSDEENICQLSEQRGSFSD
GDEGALGSPAEISIPLTYRRSMQLTPEEEVSGSESFQSSAQKIIPPLFSYRLAQKQLKEM
KRKGLTETTKVYHVSQSPLTDTVVEGAAGAALDPEGPEEASTNKFRIKSPFLDQPSINAG
ERTHSRLDFNVSLTNPALSPSQTLIRKSQLKYVGSKGGQSERSYPRHSHFRRTASFHETK
QVRPFRERSMSTLTPRQIPAYSARTRTWDQGEDRFRARARGAYPCPEKLEHPQGTRIVTE
PLSPLSKSYPMGLPARKPDLINDRPAGLVNGTDRVEPHRHKRGPSPSHKSVSRKQPSPTT
PKDSYQRGSPLSPPQYRRDKCQSFPAHPEYAFYDNTSFGLTELEQRMLDLPGYFGSNEED
ETTSTLSIEKLVI
Download sequence
Identical sequences F7A7B0
13616.ENSMODP00000013042 ENSMODP00000013042 ENSMODP00000013042 XP_001368354.1.35504 XP_016277408.1.35504

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]