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  Home > Genomes > Monodelphis domestica 76_5 > ENSMODP00000018354

Domain assignment for ENSMODP00000018354 from Monodelphis domestica 76_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000018354
Domain Number 1 Region: 1288-1380
Classification Level Classification E-value
Superfamily Immunoglobulin 2.22e-19
Family I set domains 0.0076
Further Details:      
 
Domain Number 2 Region: 1199-1274
Classification Level Classification E-value
Superfamily Immunoglobulin 1.47e-18
Family I set domains 0.011
Further Details:      
 
Domain Number 3 Region: 1397-1481
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000534
Family I set domains 0.013
Further Details:      
 
Domain Number 4 Region: 887-951
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000172
Family I set domains 0.055
Further Details:      
 
Domain Number 5 Region: 661-728
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000314
Family TSP-1 type 1 repeat 0.0035
Further Details:      
 
Domain Number 6 Region: 1542-1609
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000458
Family TSP-1 type 1 repeat 0.0021
Further Details:      
 
Domain Number 7 Region: 432-492
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000127
Family TSP-1 type 1 repeat 0.0042
Further Details:      
 
Domain Number 8 Region: 788-849
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000314
Family TSP-1 type 1 repeat 0.0038
Further Details:      
 
Domain Number 9 Region: 377-437
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000785
Family TSP-1 type 1 repeat 0.0036
Further Details:      
 
Domain Number 10 Region: 529-583
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000131
Family TSP-1 type 1 repeat 0.0042
Further Details:      
 
Domain Number 11 Region: 33-81
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000157
Family TSP-1 type 1 repeat 0.0015
Further Details:      
 
Domain Number 12 Region: 728-788
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000497
Family TSP-1 type 1 repeat 0.0021
Further Details:      
 
Domain Number 13 Region: 296-359
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000301
Family TSP-1 type 1 repeat 0.0059
Further Details:      
 
Domain Number 14 Region: 610-666
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000301
Family TSP-1 type 1 repeat 0.0068
Further Details:      
 
Domain Number 15 Region: 1670-1727
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000445
Family TSP-1 type 1 repeat 0.0062
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000018354
Domain Number - Region: 1488-1547
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000235
Family TSP-1 type 1 repeat 0.0039
Further Details:      
 
Domain Number - Region: 1609-1668
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000288
Family TSP-1 type 1 repeat 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000018354   Gene: ENSMODG00000014683   Transcript: ENSMODT00000018687
Sequence length 1764
Comment pep:known_by_projection chromosome:BROADO5:6:183223504:183608319:1 gene:ENSMODG00000014683 transcript:ENSMODT00000018687 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MERCRWATPGTPLLFLAFLLLSSRTARSEEDRDALWDAWGPWSECSRTCGGGASYSLRRC
LSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKYHGQLYEWLPVSNDPDNPCS
LKCQAKGTALVVELAPKVLDGTRCYTESLDMCISGLCQIVGCDHQLGSTVKEDNCGVCNG
DGSTCRLVRGQYKSQLSATKLDDTVVAIPYGSRHVRLVLKGPDHLYLETKTLQGAKGENS
LSTTGSFLVDNSSVDFQKFPDKEILRMAGPLTADFIVKVHNAGTADSTVQFIFYQPIIHR
WRETDFFPCSATCGGGYQLTSAECYDLRSSRVVADQYCHYYPENVKPKPKLQECNLDPCP
ASDGYKQIMPYDLYHPLPRWESTPWTACSSSCGGGIQSRTVSCVEEDIQGHVSSVEEWKC
MYTPKMPIVQPCNIFDCPKWLAQEWSPCTVTCGQGLRYRVVLCIDHRGMHTGGCSPKTKP
HIKEECIIPTPCYKPKEKLPVEAKLPWHKQAQELEEGAVVSEEPSFIPEAWSACTVTCGV
GTQVRMVKCQVLLSFSQSVADLPVDECEGPKPVSQRACYAGPCNGEISEYNPEETDLLYG
GLQDFDELFDWEYEGFTECSESCGGGVQEAVVSCLNKQTRETADESLCVTSRRPPKLLKS
CNLDPCPSRWEIGKWSPCSLTCGVGLQTRDVFCSHLLSREMNETVVLADELCHKPKPTIV
QACNRFNCPPAWYPAEWQQCSRTCGGGAQKRDVLCKQRMADGSFLELPETFCSAPRPTSQ
QACRNEDCPHEWLLSEWTQCSRSCGEGTQTRSAICRKILKSGESVIVNSSLCAPLPFSSS
VQPCILPACAGPSRPSPKHSPHITAVRKIYIQIQKQRKLHFVVGGFAYLLPKTSVVLRCP
TRRFRKPLITWEKDGQHLTSSAHITVAPFGYLKIHRLKPSDMGTYTCSAGPAQEHFVIKL
IGSNRKLLARPLGLRGEEETPPGRKNSPNEALRTQEKHQNGIFFNGSKAEKRVPPVDPGS
RYDDIVSRLLEQRGWPGELFASWEAQDSTERNISSEEDQNPEQALLHLPFTLVTEQQRLD
DLLRNISQQPEELRDLYSKHLVSQLAREIFRSHLEHQDSLLKFPEGRIHPVAIPPHKHVS
GFSSSLRISSLGSSGEMRSGQPHRKPVILRKISAAQQLSASEVVTHLGQTVALASGTLSV
LLHCEAGGNPKPTITWARNGEEVQYSNRILLQPDDSLQILAPVEADVGFYTCNATNALGS
DSVSIAVTLAGKPLVKTSRMAVTNIDLPAVIVDVGSVIKTIPGVNVTISCQVAGVPEVEV
TWFRNKSKLAPLHHLHDGSLWITNVSFSDQGLYSCRAVNLHGEVTENTQLEILDPPHPPS
QMEDIKALLSANGPNLPSVLTSPLGTQLVLSPGNSAILGCPVKGHPYPNITWFHDHQPIA
TIAEPTYHILAAGQILLIRNVSAGSQGEFSCLAQNEAGMLVQKTSLVIQEYWWSVDKLVG
CSASCGNKGIQQPQLKCVLNSTEVSPSFCAGKAKPAVQPVACNRRDCPSRWMVTPWSSCT
RSCGGGVQTRRVTCQKLKASGASVPMSNEMCSQLAKRPVDTQACNQQLCVEWAFSSWGQC
NGPCIGPRLAVQHRQVFCQTRDGISLPFEQCSALPRPVSTQNCWAEACGVHWRVSLWTLC
TATCGNYGFQSRRVDCIHIRTNKPVPEHLCSWRPRPANWQRCNITPCENMECRDTTRYCE
KVKQLKLCQLTQFKSRCCGTCGKA
Download sequence
Identical sequences F7DNN9
ENSMODP00000018354 ENSMODP00000018354

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.