SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSMODP00000022875 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000022875
Domain Number 1 Region: 162-300
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 4.21e-31
Family Canonical RBD 0.0033
Further Details:      
 
Domain Number 2 Region: 302-398
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.82e-23
Family Canonical RBD 0.00046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000022875   Gene: ENSMODG00000018345   Transcript: ENSMODT00000023280
Sequence length 527
Comment pep:novel chromosome:BROADO5:2:342039918:342070930:-1 gene:ENSMODG00000018345 transcript:ENSMODT00000023280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MATEHVNGNGTEEPMDTSSAVTHSEHFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
EAKIKALLERTSYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKD
LEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYG
YPPDYYGYEDYYDYYGYDYHNYRGGYEDPYYGYEDFQVGARGRGGRGARGAAPSRVRGAA
PPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGQGKGVEAGPDLLQ
Download sequence
Identical sequences F6PR48
ENSMODP00000022875 ENSMODP00000022875

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