SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000026495 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000026495
Domain Number 1 Region: 15-273,356-396
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.18e-45
Family WD40-repeat 0.001
Further Details:      
 
Domain Number 2 Region: 283-367
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 2.49e-16
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000026495   Gene: ENSMODG00000021199   Transcript: ENSMODT00000026969
Sequence length 410
Comment pep:known_by_projection chromosome:BROADO5:7:225617266:225690907:1 gene:ENSMODG00000021199 transcript:ENSMODT00000026969 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAEIHSRPQSSRPALLNKIEGHQDAVTAALLIPKEDGVITASEDRTIRVWLKRDSGQYW
PSIYHTMASPCSSMAYHHDSRRIFVGQDNGAIMEFHISEDFNKMNFVKTYPAHQSRVSAV
VFCLGAEWVISTGHDKCVSWMCTRSGNMLGKHFFTSWASCLQFDLDTQHAFVGDYSGQIT
LLKLEQNTCSIITTLKGHEGSIASLWWDPIQRLLFSGASDNSIIMWDIGGRKGRMLLLQG
HHDRVQSLCYLSLTRQLVSCSSDGGIAVWNMDVRREEAPQWLESDSCQKCEQPFFWNIKQ
MWDTKTLGLRQHHCRKCGQAVCGKCSTRRSTYPVMGFEFQVRMCDSCYDSVKDEDRTSLA
TFHEGKHNISHMSMDVARGLMVTCGTDRVVKIWDMTPVVGCSLATGFSSR
Download sequence
Identical sequences F6XE34
XP_001374298.1.35504 ENSMODP00000026495 ENSMODP00000026495

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]