SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSMODP00000033056 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000033056
Domain Number 1 Region: 1-75
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.42e-22
Family Canonical RBD 0.0082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000033056   Gene: ENSMODG00000007884   Transcript: ENSMODT00000034634
Sequence length 576
Comment pep:known_by_projection chromosome:BROADO5:8:12695337:12702804:-1 gene:ENSMODG00000007884 transcript:ENSMODT00000034634 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KIFVGNVSAACTSQELRSLFERHGPVIECDVVKDYAFVHMEKEADAKAAIEQLNGKEVKG
KRINVELSIKGQKKGPAGLAAPGEKAKKPGAGDTATTGFDGRPRQPSPPFYGRDRSPLRR
SPPRASYVTPLTAQPATYRAQPSVSLGAAYRAQPSASLGVAYRTQPMAAQAASYRAQPSV
SLGAPYRAQLASPGSQPGGASSLGPYGGAQPSASALTSYGAQSAAASSLTSYGAQASSLA
SYGNQPASYGVRAAASSYNAQSAASSLTSYGAQAASYGAQPATSSLAYGAQAASYNAQPT
AASYNAQPTAASYNAQSGPYAAQPAASYSAQPAAYVAQPATAAAYAAQPAAYAAQAAGPL
AGSYGAQPVVTAQLNAYGAQATMGLSGSYGAQSAAATGSYGAAAAYGAQPTAAALAAPYR
TQSSAPLGSSYTAQQQPPQPAAASYRGQPGATYEGAGQPSAAYLSLSQGAVANAATSTPP
PYERTRLSPPRDSYDDPYKKAAAIMSKRYGSNRRLAELSDYRRLSDSQLSFRRSPTKSSL
DYRRLPDAHSDYARYSGSYSEYLRAAQMHSGYQRRL
Download sequence
Identical sequences F6XIU5
ENSMODP00000033056

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