SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000036878 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000036878
Domain Number 1 Region: 52-505
Classification Level Classification E-value
Superfamily Sema domain 3.4e-130
Family Sema domain 0.000000288
Further Details:      
 
Domain Number 2 Region: 829-886
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000000116
Family TSP-1 type 1 repeat 0.00029
Further Details:      
 
Domain Number 3 Region: 610-660
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000000981
Family TSP-1 type 1 repeat 0.00035
Further Details:      
 
Domain Number 4 Region: 885-943
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000144
Family TSP-1 type 1 repeat 0.00037
Further Details:      
 
Domain Number 5 Region: 501-552
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000384
Family Plexin repeat 0.004
Further Details:      
 
Domain Number 6 Region: 664-709
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000249
Family TSP-1 type 1 repeat 0.0013
Further Details:      
 
Domain Number 7 Region: 555-607
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000641
Family TSP-1 type 1 repeat 0.00085
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000036878
Domain Number - Region: 943-988
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000144
Family TSP-1 type 1 repeat 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000036878   Gene: ENSMODG00000018325   Transcript: ENSMODT00000038473
Sequence length 1132
Comment pep:known_by_projection chromosome:BROADO5:4:87665235:87819823:-1 gene:ENSMODG00000018325 transcript:ENSMODT00000038473 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVFPRPLAITLSLSGLILLALHLSTSHNVSDAPSNEQQLCTLREHPTIAFEDLKPWVSNF
TYPGVQDFSHLALDPSRNQLIVGARNYLFRLSLTNISLLQATEWSSNEETRKSCQSKGKT
EEECQNYVRVLIVSGRKVFTCGTNAFSPVCSSRQAGNLSRTIEKINGVARCPYDPRHNST
AVISEQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAYDIGLFAY
FFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEIPFYYNE
LQSAFHLPEQDLVYGVFTTNVNSIAASAVCAFNLILKHALLISPFFLIPQWTERAWGAIG
FMGLSTFYAQCGTLRDVGPNENLTERSLQDAQRLFLMSEVVQPVTPDPCITQDSVRFSHL
VVDLVQGKDTLYHVLYIGTESGTILKALSTASRSLRGCYLEELQVLPPGRREPLRSLRIL
HSARVLFVGLSDGVLRIPLERCATYRTQGECLGARDPYCGWDGKQQRCSTLEDSANMSLW
IQNITACPVRNLTWDGGFGPWSPWQPCEHVDGENSGSCQCRARACDNPRPRCGGRACPGP
TIHVANCSRNGAWTPWSSWALCSTSCGIGFQVRQRSCSNPAPRHGGRICVGKSREERFCN
ENSPCPVPIFWATWGSWSKCSSNCGGGVHSRHRVCENGNSCPGCSVQKKPSWGHVGSCVL
LSVPGAPGTSEVSRLFHPREYKTCNPESCPEVRRNTPWTPWLPVNVTQGGARQEQRFRFT
CRAPLPDPHGLQFGRKRTETRSCPADGSGACDTDALVEDLLRTGSNAPHVVSGGWAAWGP
WSSCSRDCELGFRTRKRTCTNPEPRNGGLPCVGDVTEYQDCNSQPCPVRGAWSCWTPWSP
CSASCGGGHYQRTRSCTSPAPSPGEDICIGLHTEEALCATQSCPGGWSLWAEWSVCGEDG
TQSRSRDCEELVPGTAPCLGNGSQIRTCPYSEIPVILPASSIDDATSCGGFSLIHLVATG
VSCFLGSGLLTFAVYLSCQRCQRQTQESTLVHPTTPNHLNYKSGGGGTPKNEKYTPMEFK
TLNKNNLIPDDRANFYPLQQTNVYTTTYYPSSLGKHSFRPEASPGQRCFTNS
Download sequence
Identical sequences F6UPB5
13616.ENSMODP00000036878 ENSMODP00000036878 ENSMODP00000036878

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]