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Domain assignment for ENSMODP00000039454 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000039454
Domain Number 1 Region: 429-588
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.33e-40
Family Retroviral integrase, catalytic domain 0.0015
Further Details:      
 
Domain Number 2 Region: 169-311
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.59e-27
Family Ribonuclease H 0.0032
Further Details:      
 
Domain Number 3 Region: 2-115
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.37e-18
Family Reverse transcriptase 0.0000469
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000039454   Gene: ENSMODG00000029516   Transcript: ENSMODT00000042560
Sequence length 700
Comment pep:novel chromosome:BROADO5:1:36247725:36250118:-1 gene:ENSMODG00000029516 transcript:ENSMODT00000042560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSAPALGIPDYNKPFTLYVHERRGVASGVLTQTLGPSQRPIAYYSAQLDPVAAGAPPCLR
GVAATALLVTKTVDLVLGCPLTIMCPHEIEALLVKHRTQAFSDQRITRYEITLLNSENIT
LKRCSTLNPATLLPDLPTSGEPLHNCETLVSMAEKPRDNLLDTPLDNADLILFTDGSSFM
RDGIRYTGAAVVSEFATEWSASLPSNISAQGAELIALKQACIIAKDKKATIYTDSRYAFG
ICHSVGMLWLQRGFLTSAGKSIANAEIINEVLSALKLPKALAVVHCSAHTGGSDPVSRGN
DRADAAAKLAAIEGPGLILTLTTTDNLNLSLSYNEKEVEKWKQKFKAKQINGVWVSPEGK
PLLPRSFYNQICQSIHKNGHFGTQGIVDSVKRVWIAPGITTVASKVCSACPICQAYNQHA
YSGKAFGGRPLAYTPFEHLQIDFITMPKAGRYKFCLVIVDQLTRWPEAFPTTRATADFVA
KILLKEIIPRFGLPARIDSDRGSHFTDSVLNQIYSCLGITPKFHVPYHPQSSGQVERMNK
DLKTMIGKLCTETHLKWPEILPLALFYLRSRPRGDLHISPFEMLFGHPPIQAKPFSPAYT
SLLGGDITIASYIQELQHKLRELHESGAAVQAGPLDFSLHDLNPGDKVYIKNFKRTGATE
PSWEGPFQILLTTPTSIKIGERDSWIHCSHVKKASSAETD
Download sequence
Identical sequences K7E103
ENSMODP00000039454 ENSMODP00000039454

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