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Domain assignment for ENSMODP00000040592 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000040592
Domain Number 1 Region: 106-531
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.07e-115
Family Reverse transcriptase 0.0000000122
Further Details:      
 
Domain Number 2 Region: 845-1004
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.33e-40
Family Retroviral integrase, catalytic domain 0.0014
Further Details:      
 
Domain Number 3 Region: 585-727
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.52e-26
Family Ribonuclease H 0.0032
Further Details:      
 
Domain Number 4 Region: 2-57
Classification Level Classification E-value
Superfamily Acid proteases 0.000012
Family Retroviral protease (retropepsin) 0.008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000040592   Gene: ENSMODG00000027641   Transcript: ENSMODT00000043697
Sequence length 1116
Comment pep:novel chromosome:BROADO5:1:437538188:437542546:-1 gene:ENSMODG00000027641 transcript:ENSMODT00000043697 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGVSGITQRVKRLPPRMVSVGPLEVQHSFLLMPDSPLNLLGRDLLCKLRATITCSPDGSL
SLEVPEESLNLLPVLLSENQEAKEPSIFEIPKDIPESLWATSSSDVGLLKSAVPVQIKTK
SSPPPSIPQYPLSKEAIEGITPVINSLIEQGIIIPCKSEYNTPILPIKKPKKGPDGKHIY
RFVQDLRAVNNHVIKRHSVVSNIHTIISSIPSTATYFTVVDLCSAFFSIPIHENSRHIFA
FTWKGSQYTWCRLPQGYVESPSLFEQILSQDTDNITFKNSKLIKYVDDLLLASTDAETCQ
EDSKHLLLELHKRGHKISKDKVQWCLQKVEYLGFILTAGARYISPKRIENIQKLSAPTTK
KQLRAILGATGFCRQWIPCYGEITKPLIALTKDSVPEPLKLEPEHLSALSDLKKAIMSAP
ALGIPDYNKPFTLYVHERRGVASGVLTQTLGPSQRPIAYYSAQLDPVAAGAPPCLRGVAA
TALLVTKTVDLVLGCPLTIMCPHEIEALLVKHRTQAFSDQRITRYEITLLNSENITLKRC
STLNPATLLPDLPTSGEPLHNCETLVSMAEKPRDNLLDTPLDNADLILFTDGSSFMRDGI
RYTGAAVVSEFATEWSASLPSNISAQGAELIALKQACIIAKDKKATIYTDSRYAFGICHS
VGMLWLQRGFLTSAGKSIANAEIINEVLSALKLPKALAVVHCSAHTGGSDPVSRGNDRAD
AAAKLAAIEGPGLILTLTTTDNLNLSLSYNEKEVEKWKQKFKAKQINGVWVSSEGKPLLP
RSFYNQICQSIHKNGHFGTQGIVDSVKRVWIAPGITTVASKVCSACPICQAYNQHAYRGK
AFGGRPLAYTPFEHLQIDFITMPKAGRYKFCLVIVDQLTRWPEAFPTTRATADFVAKILL
KEIIPRFGLPARIDSDRGSHFTDSVLNQIYSCLGITPKFHVPYHPQSSGQVERMNKELKT
MIGKLCTETHLKWPEILPLALFYLRSRPRGDLHISPFEMLFGHPPIQAKPFSPAYTSLLG
GDITIASYIQELQHKLRELHESGAAVQAGPLDFSLHDLNPGDKVYIKNFKRTGATQPSWE
GPFQILLTTPTSIKIGERDSWIHCSHVKKASSAETD
Download sequence
Identical sequences K7E490
ENSMODP00000040592 ENSMODP00000040592

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