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Domain assignment for ENSMODP00000040821 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000040821
Domain Number 1 Region: 429-588
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.63e-40
Family Retroviral integrase, catalytic domain 0.0015
Further Details:      
 
Domain Number 2 Region: 169-311
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.28e-25
Family Ribonuclease H 0.0035
Further Details:      
 
Domain Number 3 Region: 2-115
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 6.37e-18
Family Reverse transcriptase 0.0000512
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000040821   Gene: ENSMODG00000028815   Transcript: ENSMODT00000043929
Sequence length 616
Comment pep:novel chromosome:BROADO5:3:434205393:434207873:-1 gene:ENSMODG00000028815 transcript:ENSMODT00000043929 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSAPALGIPDYNKPFTLYVHERRGVASGVLTQTLGPSQRPIAYYSAQLDPVAAGAPPCLR
GVAATALLVTKTIDLVLGCPLTIMCPHEIEALLIKHRTQAFSYQRITRYEITLLNSENIT
LKCCSTLNPATLLPDLPTSGEPLHSCETLVSMAEKPRDNLLDTPLDNADLILFTDGSPIM
RDGIRYTGAAVVSEFATEWSASLPSNISAQGAELIALKQACIIAKEKKATIYMDSRYAFG
ICHSVGMLWLQRGFLTSAGKSIANAEIINEVLSALKLPKALAVVHCSAHTGGSDPVSRGN
DRADAAAKLAAIEGPGLILILTTTDNLNLSLSYNEKEVEKWKQKFKAKQINGVWVSSEGK
PLLPRSFYNQICQSIHKNSHFGTQGIVDSVKRVWIAPGITTIASKVCSACSICQAYNQHA
YRGKAFGGRPLAYTPFEHLQIDFITMPKAGRYKFCLVIVDQLTRWPEAFPTTRATADFVA
KILLKEIIPHFGLPARIDSDRGSHFTNSVLNQIYSCLGITPKFHVPYHPQSSGQVERMNK
ELKTMIGKLCTETHLKWPEILPLALFYLRSRPRGDLHISPFEMLFGHPPIQAKPFSLAYT
LLLGGDITIASYIQEL
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Identical sequences K7E4W9
ENSMODP00000040821 ENSMODP00000040821

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