SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000031467 from Monodelphis domestica 76_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000031467
Domain Number 1 Region: 481-538
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.47e-26
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 2 Region: 239-300
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.14e-24
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 3 Region: 789-846
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.93e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 4 Region: 733-790
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.03e-24
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 5 Region: 537-594
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.27e-23
Family Classic zinc finger, C2H2 0.0025
Further Details:      
 
Domain Number 6 Region: 426-482
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.13e-22
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 7 Region: 387-439
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.65e-20
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 8 Region: 831-883
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.06e-19
Family Classic zinc finger, C2H2 0.0022
Further Details:      
 
Domain Number 9 Region: 677-734
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.43e-18
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 10 Region: 579-631
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.55e-18
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 11 Region: 622-678
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.59e-16
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000031467   Gene: ENSMODG00000023737   Transcript: ENSMODT00000033040
Sequence length 889
Comment pep:known_by_projection chromosome:BROADO5:4:384340051:384360561:-1 gene:ENSMODG00000023737 transcript:ENSMODT00000033040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAKMRWPRPVTDVTCCHYVTATPPPPFPLPQDCGPDPCLCPCPCPSEGSSLPTCARIPGG
ATVNGLDHLLPVSADLAAGSLPPAAPGAWGLAESPRQSRGDPPLALGMAVPLNSHVLGPQ
EHFGLLSLKVMDDMPEEEEFIPGGEDFDTDYDAFCQGLTEDLGDPHERAEQFLTIMLGNV
ETWMKLQHLEPSEEELFLEDSPTQLLEKKDLLSQDLAFHEEWNPEEEVEEMSAEFLASRS
QEPVTFQDVAVDFTQEEWRQLGPAQRDLYRDVMLENYGNLVSLAGLVVSEPNVIYHLEQK
KEPWLLDLQGSDKTKPSIDRSPNLYLLVFLCPGFSRAFWSGVHRSQVEDPCYSHSGPPEG
HVLLSASYCPSFRFGLLWEDLRIYFKKPFECGACGKTFSQNTCLTVHQRIHTGEKPYECD
ECGKIFSDSSTLIRHQIIHNIEKPYKCHECEKSFSYCSALIRHLRIHTGEKPYECNECGK
AFSHSTCLTQHQRTHTGEKPYECNECGKAFSQNSSLYYHQRTHTGEKPYKCNECGKAFSY
HASLTQHKQTHTGEKPYECSECGKTFSRSTYIIEHQRIHTGEKPYECTECGKAFRYCSAL
TQHQKMHTEEKPYECRECGKGFHFYSALIQHRKTHTGEKPYECTECGKAFIRSTCLTQHQ
KLHTEEKSHENSELRKVFGQSSSHPEKQRIKTGGKSYECNDCGKIFKYFSILSQHQKTHT
GEKPYECNECGKTFSRSTCLTKHNRTHTGEKPYLCSVCGKAFSQNSSLTEHQRIHTGEKP
YECSKCGKAFSRSTFLTRHQQTHTGEKPYECSECGKTFSQRSSLFYHQRTHTGEKPYECF
ECGKSFSRSTFLTQHQRIHTGEKPYACSECGNTFSRRAALTKHQKLHTE
Download sequence
Identical sequences F6X7Z5
ENSMODP00000031467 ENSMODP00000031467

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]