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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000000519

Domain assignment for ENSOPRP00000000519 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000000519
Domain Number 1 Region: 2138-2269
Classification Level Classification E-value
Superfamily Cadherin-like 8.28e-35
Family Cadherin 0.00056
Further Details:      
 
Domain Number 2 Region: 2656-2766
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-29
Family Cadherin 0.00028
Further Details:      
 
Domain Number 3 Region: 1305-1408
Classification Level Classification E-value
Superfamily Cadherin-like 3.85e-29
Family Cadherin 0.0011
Further Details:      
 
Domain Number 4 Region: 238-372
Classification Level Classification E-value
Superfamily Cadherin-like 7e-29
Family Cadherin 0.00054
Further Details:      
 
Domain Number 5 Region: 1200-1311
Classification Level Classification E-value
Superfamily Cadherin-like 5.14e-28
Family Cadherin 0.0003
Further Details:      
 
Domain Number 6 Region: 1929-2052
Classification Level Classification E-value
Superfamily Cadherin-like 5.85e-28
Family Cadherin 0.00047
Further Details:      
 
Domain Number 7 Region: 3386-3506
Classification Level Classification E-value
Superfamily Cadherin-like 1.34e-27
Family Cadherin 0.00078
Further Details:      
 
Domain Number 8 Region: 3076-3187
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-27
Family Cadherin 0.00091
Further Details:      
 
Domain Number 9 Region: 2040-2142
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-27
Family Cadherin 0.0011
Further Details:      
 
Domain Number 10 Region: 1831-1940
Classification Level Classification E-value
Superfamily Cadherin-like 1.36e-26
Family Cadherin 0.00074
Further Details:      
 
Domain Number 11 Region: 1404-1531
Classification Level Classification E-value
Superfamily Cadherin-like 1.43e-26
Family Cadherin 0.0011
Further Details:      
 
Domain Number 12 Region: 3175-3283
Classification Level Classification E-value
Superfamily Cadherin-like 2.57e-26
Family Cadherin 0.00075
Further Details:      
 
Domain Number 13 Region: 2249-2360
Classification Level Classification E-value
Superfamily Cadherin-like 7.57e-24
Family Cadherin 0.0016
Further Details:      
 
Domain Number 14 Region: 2970-3073
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-23
Family Cadherin 0.00081
Further Details:      
 
Domain Number 15 Region: 1729-1830
Classification Level Classification E-value
Superfamily Cadherin-like 2.43e-22
Family Cadherin 0.00067
Further Details:      
 
Domain Number 16 Region: 2760-2858
Classification Level Classification E-value
Superfamily Cadherin-like 8.57e-22
Family Cadherin 0.001
Further Details:      
 
Domain Number 17 Region: 2859-2968
Classification Level Classification E-value
Superfamily Cadherin-like 9.42e-22
Family Cadherin 0.0019
Further Details:      
 
Domain Number 18 Region: 3496-3599
Classification Level Classification E-value
Superfamily Cadherin-like 7e-21
Family Cadherin 0.001
Further Details:      
 
Domain Number 19 Region: 3949-4061
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.91e-21
Family Laminin G-like module 0.015
Further Details:      
 
Domain Number 20 Region: 3285-3390
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-20
Family Cadherin 0.0022
Further Details:      
 
Domain Number 21 Region: 129-250
Classification Level Classification E-value
Superfamily Cadherin-like 5.42e-19
Family Cadherin 0.0022
Further Details:      
 
Domain Number 22 Region: 2566-2662
Classification Level Classification E-value
Superfamily Cadherin-like 1.36e-18
Family Cadherin 0.0036
Further Details:      
 
Domain Number 23 Region: 1513-1619
Classification Level Classification E-value
Superfamily Cadherin-like 3.43e-16
Family Cadherin 0.0021
Further Details:      
 
Domain Number 24 Region: 3842-3968
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000455
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 25 Region: 2348-2395
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000514
Family Cadherin 0.0031
Further Details:      
 
Domain Number 26 Region: 68-135
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000971
Family Cadherin 0.0086
Further Details:      
 
Domain Number 27 Region: 1622-1736
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000742
Family Cadherin 0.0069
Further Details:      
 
Domain Number 28 Region: 4420-4457
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000234
Family EGF-type module 0.011
Further Details:      
 
Domain Number 29 Region: 4304-4393
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0000192
Family Laminin G-like module 0.043
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000000519
Domain Number - Region: 3601-3691
Classification Level Classification E-value
Superfamily Cadherin-like 0.00298
Family Cadherin 0.02
Further Details:      
 
Domain Number - Region: 3796-3854
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00888
Family EGF-type module 0.011
Further Details:      
 
Domain Number - Region: 2476-2517
Classification Level Classification E-value
Superfamily Cadherin-like 0.0614
Family Cadherin 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000000519   Gene: ENSOPRG00000000553   Transcript: ENSOPRT00000000572
Sequence length 4918
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4865:157:204525:1 gene:ENSOPRG00000000553 transcript:ENSOPRT00000000572 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MDLAATRAAGRPWLPLHSLSVFQLLRALWLLWLLPGPAQVLGTEQRQVFQVLEEQPPGTL
VGTIQTRPGFTYRLSESHALFAINSSTGALYTTATIDRESLPSDVVNLVVLSSAPTYPTE
VRVLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDADIGSNGVDHRSYRIIRGN
EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTV
QDINDNPPVFGSSHYQAGVPEDAVVGSSVLKVAAADADEGTNADIRYRLQDEGTPFQMDA
ETGLITVREPLDFEARRQYSLTVQAMDRGLPSLTRAEALIQLLDVNDNDPVKFRYFPATS
RYASVDENAQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXESLMRRRGTAFSFTVIATQGLPQPLKDQVTVHVYMKDIN
DNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIDSAT
GQVTLIGKLDYEATPAYSLVIQAMDSGTISLNSTCTLHIDILDENDNTPSFPKSTLFVDV
VENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQS
LYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTA
HDPDADINGQLTYTIVQQMPRGNHFDIDEVKGTIYTNAEIDREFANLFELTVKANDQAVP
IETRRYALKNVTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVE
YEIINGDTNTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTVILQGL
DGPVFTQPKYITILKEGEPIGTNVISIEAASPRGADAPEEYYIVSVRCEEKTVGRLFTIG
RHSGTIQTAAILDGEKGACLYLGGVYAIKKSTAFPRTQRAEVEITLQDINDNPPVFPTDT
LDLTVEENIGDGSKIMQLTAMDADERANALVTYTIISGADDSVRIDPESGDLIATKRLDR
ERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAIL
ATDDDSGVNGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTVRAEDGGGQ
FTTIRVYFNILDVNDNPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLAYSIA
SGDSLGQFTVDNSGVLKVVKALDRESQSFYNLVVQVHDLPQHPASRFTSTAQVSIILLDV
NDNPPTFLSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPWGSKFSIGTIDG
EVRLTGELDREDVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPVFAQALYKVEIN
ENTLTGTDIIQVFAVDGDEGTNGQIRYGIVGGNANQEFRIDSVTGAITVAKPLDRERTPN
YLLTVQATDRGSTPRTDTSTVSIILLDINDFVPIFELSPYSVNVPENLEILPRTILQVVA
RDDDQGSNSKLSYALFAGNEDNAFTLSTSGELKVTQSLDREAKEHFVLVLTAIDSGSPAL
TGTGTVSVIVDDVNDNVPTFASKMYFTSIPEDAPTGTDVLLVNASDADVSTNAVVXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXGSFVLAVTLPHADIGTNSELHYSLMGRNSEKFHFDPLRGXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVRFVIDADFVRAKEQTFMFPEQPVGTLVT
TVTGSSLRGEPLSYYIASGNLGNTFQIDQSTGQVSISQPLDFEKIQKYVIRIEARDGGFP
PFSSYEKLDITVLDVNDNSPVFKEDPFVAEILENLSPRKILAVSAVDKDSGPNGQLDYEI
INGNEENSFSINHATGEIRSVRPLDREKVSHYVLTVKSSDKGSPSRSASVKVIINILDEN
DNAPRFSQIFSAQVPENSPLGYTVTRVTTSDEDIGVNAISRYSIMDTSLPFTIHPSTGDI
IISRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEI
GSRVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNVN
RHSFIVTSSDRGNPSLLSETTVTINTVDSNDNAPEFLQTQYFTPVTKNVKIGTKLIKVTA
IDNKDFGLNSEVDYFISNGNHLGKFKLDTNTGWISIASSLISDLNQNFLLTVTAKDKGNP
PLSSQATVEITVTEENYHTPEFSQSHLSATIAESQSVGTIIRTVSARDRDAAMNGLIRYS
ISSGNEEGIFAINSSTGVLTLAKPLDYELYQKHEMTVSAIDGGWVARTGYCSVTINVIDV
NDNSPIFIPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQTSDSDLFVIDPNT
GVITTQGFLDFETKQSYHLPVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEI
SEAAPRGTVVGEVFASDRDLGTDGEVHYLIFGDSRKKGFQINKRTGQIYVSGLLDREKEE
RVSLKVLAKNFGSIRGADIDEVTVNITVLDANDPPVFSLNIYSVQISEGVPIGTHVTFVS
AFDSDSIPSWSRFSYFIGSGNENGAFSVNPQTGQITVTAELDRETLPIYNLTVLAVDSGT
PSATGSASLIVTLEDINDNGPTLSISEGEVMENKRPGTLVMTLQSTDPDLPPNQGPFTYY
LLSTGPATNYFSLNTAGVLSTTREIDREQISDFYLSVVTRDSGIPQMSSTGTVHITVMDE
NDNPSQSRTVELFVNYYGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSIPVGTCD
LHSQPRSTDGTFDLTVLSNDGVHSTVTSNIRVFFAAFSNTTVDNSILLRVSVPTVKDFLT
NHYLHFLRIASSQLTGLGTAVQLYGAYEDNNRTFLLAAVKRNNNQYVNPSGVATFFESIK
DILLRQSGVKVESVDHDSCIHGPCQNGGSCIRRLAVSSVLKSYESLPVIIMANEPLQPFL
CKCLPGYAGNWCETDIDECLPSPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINECLPS
PCKNGAVCQNFPGGFNCVCKTGYTGKTCESSVNYCECNPCFNGGSCQSGVDSYYCHCPFG
VFGKHCELNSYGFEELSYMEFPSLDPNNNYIYVKFSTIKSHALLLYNYDNQTGDRAEFLA
LEIAEERLRFSYNLGSGTYKLTTMKKVSDGHFHTVIARRAGMXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLIGKNGTVTISVDRIYNRDI
IHTTQDFGGLEVLTMSLGGIPPNQAYRDTQTAGFDGCIASMLYGGESLPFSGKHSLASIS
KTDPSVKIGCRGPNICASNPCWGDLLCINQWYAYKCVPPGDCASHPCQNGGSCEPGLHSG
FTCSCPESHTGRTCETVVACLGILCPPGKMCKAGSPGGHVCVPTQGPEEISLPLWAVPAI
VGSCATVLALLVLSLILCNQCRGKKPKNHKGEKKPKEKKKKGSENVAFDDPDNIPPYGDD
MTVRKQPEGNPKPDIIERENPYLIYDETDIPHNSETIPSAPLASPEQEIEHYDIDNASSI
APSDADIIQHYKQFRSHTPKFSIQRHSPLGFARQSPMPLGASSLTYQTSYGPGLRTSSLS
HSACPTPNPLSRHSPAPFSKSSSFYRNSPARELHLPIRDGSTLELHGEACQPGLFNYATR
LGRRSKSPQAMASHGSRPGSRLKQPIGQIPLESSPPVGLSIEEVERLNTPRPRNPSICSA
DHGRSSSEEDCRRPLSRTRNPADGIPAPESSSDSDSHESFTCSEMEYDREKPMVYTSRMP
KLSQVNESDADDEDNYGARLKPRRYHGRRPEGGPVGTKAAAPGGADSTLPMKLGQQAR
Download sequence
Identical sequences ENSOPRP00000000519 ENSOPRP00000000519

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.