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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000000544

Domain assignment for ENSOPRP00000000544 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000000544
Domain Number 1 Region: 905-1073
Classification Level Classification E-value
Superfamily Fibronectin type III 1.43e-26
Family Fibronectin type III 0.00088
Further Details:      
 
Domain Number 2 Region: 1630-1793
Classification Level Classification E-value
Superfamily Fibronectin type III 2.45e-22
Family Fibronectin type III 0.0000183
Further Details:      
 
Domain Number 3 Region: 723-888
Classification Level Classification E-value
Superfamily Fibronectin type III 2.79e-22
Family Fibronectin type III 0.00075
Further Details:      
 
Domain Number 4 Region: 1810-1983
Classification Level Classification E-value
Superfamily Fibronectin type III 3.11e-22
Family Fibronectin type III 0.000017
Further Details:      
 
Domain Number 5 Region: 1267-1434
Classification Level Classification E-value
Superfamily Fibronectin type III 2.82e-21
Family Fibronectin type III 0.0000124
Further Details:      
 
Domain Number 6 Region: 408-463
Classification Level Classification E-value
Superfamily Kringle-like 9.14e-21
Family Fibronectin type II module 0.0000527
Further Details:      
 
Domain Number 7 Region: 1444-1532
Classification Level Classification E-value
Superfamily Fibronectin type III 2.02e-20
Family Fibronectin type III 0.00000852
Further Details:      
 
Domain Number 8 Region: 1989-2077
Classification Level Classification E-value
Superfamily Fibronectin type III 6.12e-20
Family Fibronectin type III 0.00000317
Further Details:      
 
Domain Number 9 Region: 557-603
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000000929
Family Fibronectin type I module 0.0017
Further Details:      
 
Domain Number 10 Region: 515-559
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000000366
Family Fibronectin type I module 0.0045
Further Details:      
 
Domain Number 11 Region: 610-697
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000778
Family Fibronectin type III 0.00000348
Further Details:      
 
Domain Number 12 Region: 231-275
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000128
Family Fibronectin type I module 0.00011
Further Details:      
 
Domain Number 13 Region: 467-508
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000157
Family Fibronectin type I module 0.002
Further Details:      
 
Domain Number 14 Region: 185-228
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000628
Family Fibronectin type I module 0.00012
Further Details:      
 
Domain Number 15 Region: 50-91
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000249
Family Fibronectin type I module 0.00018
Further Details:      
 
Domain Number 16 Region: 142-182
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000353
Family Fibronectin type I module 0.00018
Further Details:      
 
Domain Number 17 Region: 2376-2417
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000118
Family Fibronectin type I module 0.0026
Further Details:      
 
Domain Number 18 Region: 2334-2376
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000015
Family Fibronectin type I module 0.0031
Further Details:      
 
Domain Number 19 Region: 2202-2265
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000568
Family Fibronectin type III 0.0032
Further Details:      
 
Domain Number 20 Region: 306-344
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000103
Family Fibronectin type I module 0.00038
Further Details:      
 
Domain Number 21 Region: 1521-1586
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000267
Family Fibronectin type III 0.00023
Further Details:      
 
Domain Number 22 Region: 94-127
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000194
Family Fibronectin type I module 0.00021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000000544   Gene: ENSOPRG00000000554   Transcript: ENSOPRT00000000597
Sequence length 2470
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2404:140083:206689:-1 gene:ENSOPRG00000000554 transcript:ENSOPRT00000000597 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MLRGPGHGLLLLLSLLCLGTAVPSTDASKSKRQAQQIVQPQSPVAVSQSKPGCYDNGKHY
QINQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIXXXXXXXXXXXXXRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTS
YRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHTSQSTSAGSGPFTDMRASVYQPQPPQ
QPAAYGHCITDSDVVYSEGMQWLKTQGNKQMLCTCLGNGVSCQETXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVQTRGGNSNGALC
HFPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCYGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKFVHGVRYQCYCYGRGIGEWHCQ
PLQTYPTSGVVIITETPSQPNSHPIQWNAPDPSHISKYILRWRPKNSVGRWKEATIPGHL
NSYTIKGLRPGVIYEGQLISIQQYGHREVTRFDFTTTSTSTPMTSNTVTGETAPLSPVVA
TSESVTEITASSFVVSWVSASDMVSGFLVEYELSEEGDEPQYLDLPSTATSVNIPDLLPG
RKYIVNVYQISEDGKQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWNRPQAPITGYRI
VYSPSVEGSSTELNLPESANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGIPR
ADEVSPPRDLQFVEVTDVKVTIMWTPPDSPVTGYRVDVLPVSLPGEHGQRLPVSRNTFAE
ITGLSPGVTYYFKVFAVNQGRESRPLTAQQTTKLDAPSNLQFVNETDSSVVIIWTPPRAH
ITGYLLTVGPTRGGQPTQQTLRPSVTKYPVQDLQPGSEYTVTLIAFKDNFQSPKVTGVFT
TLQPHSSIPAYNTEVTETSIVITWTPAPRIGFKXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXQVLRNGKEKDAPIVNRVTPLSPPTNLHLESNPETGVLTVSWERSTAPDIX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXVPQLTDLSFVDITDSSIGLRWTPLNSSIIGYRITVVAAGEGIPIFEEFVDSSVGYYTV
TGLEPGIDYDISVITLINGGESAPTTLTQQTAVPSPTDLRFTNIGSDTMRVTWAPPPSIE
LTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPLTEYLVSVSSVYEQHESAPLRGRQ
KTGLAAPTGIDFSDITTNSFVVHWIPPRAHVTGYWIRHHPEHHSGRPREDRVPPNRNSIT
LMNLSPGTEYVVSVVALNGREQSPPLIGQQSTVSDVPKDLEVIASTPTSLLISWEPPPVT
VRYYRIMYRETGKNSPVQKMRVSGTKITXXXXXXXXXXXXXXXXXXXXXXXXSPASSEPI
SINYRTEIDKPSQMQVTDVQDNSISIRWLPSRSPVTGYKVTTVPKNGSGPSKTKTVGPDQ
TEMTIEGLQPTVEYVVSVYAQSQNGESKPLVQTAVTNIDRPKRLAFTDVDVDSIKIAWES
PQGQVSRYRVTYSNPEDGIHELIPAPGGEEDTAELQGLRPGSEYTVSVVALHGDMESQPL
IGVQSTAIPAPTDLKFIQVTPTSLTAQWTPPRVQLTGYRVQVTPKEKTGPMKEINLAPDS
SSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITITW
RTKTETITGFQVDAIPTNGLTPVQRTIKPDVRSYTITGLQPGTDYKIHLYTLNDNARSSP
VEICESKAIDAPSNLRFLATTPNSLLVSWQPPRAKITGYIIKYEKPGFPPREVVPRPRPG
VTEATITGLEPGTEYTIYIIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPEILDVP
STVQKTPFITNPDTGNGIQLPGTSGQQPSVGQQMIFEEHGFRRTTPPTAATPVNLRPRPY
PPNVDEDFQISHVPRGDVDHHLYPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISC
QPVGIDEQPLQFRVPGTSTSATLTGLTRGVTYNIIVEALKDQRRHKVREEVVTVGNSVNG
GLNQPTDDSCFDPYTVSHYAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWWSDNGV
NYKVGEIWDCQRDNGQMMSCTCLGNGKGEFKCDPHETTCYDDGKMYHVGEQWQKEYLGAI
CSCTCFGGQRGWRCDNCRRPGSELSPEGSTSHSYNQYSQRYHQRTNTNVNCPIECFMPLD
VQADREDSRE
Download sequence
Identical sequences ENSOPRP00000000544 ENSOPRP00000000544

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.