SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000000660 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000000660
Domain Number 1 Region: 29-176
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.84e-42
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.00043
Further Details:      
 
Domain Number 2 Region: 150-337
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.17e-37
Family Laminin G-like module 0.0077
Further Details:      
 
Domain Number 3 Region: 721-737,773-935
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.14e-35
Family Laminin G-like module 0.0018
Further Details:      
 
Domain Number 4 Region: 353-520
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.48e-35
Family Laminin G-like module 0.0044
Further Details:      
 
Domain Number 5 Region: 966-1170
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.42e-27
Family Laminin G-like module 0.009
Further Details:      
 
Domain Number 6 Region: 549-585
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000008
Family EGF-type module 0.014
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000000660
Domain Number - Region: 577-633
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 0.00767
Family Fibrinogen C-terminal domain-like 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000000660   Gene: ENSOPRG00000000715   Transcript: ENSOPRT00000000725
Sequence length 1300
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2341:80111:972393:1 gene:ENSOPRG00000000715 transcript:ENSOPRT00000000725 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDSVPLLTRVLTLLFSGFWHLGLTATNYNCVEPLAAELSPMAFTSSSDLTGTPSAAQLNR
RVGIGGWSPADSSAQQWLQLDFGNRVEITAVATQGRYGSSDWVTNYSLMFSDTGHNWKQY
RQEDSIWTFLGNVNADSVVHHKLPHSVRARFIRFVPLRWNPSGKIGMRVEVYGCSYKSDI
ANFDGRSLLLYRFSQKLMSTLKDVIFLKFKSLQGDGVLFHGEGQRGDHITLELQKGRLAL
HLNLDDSSKARPSSSPPAATLGSLLDDQHWHSVLVERVGKQVNFTVDRHTQHFRSKGVAD
SLDIDYELSFGGIPVPGKPGTFLKKNFHGCIENLYYDRVNIIDLAKRRKHQIYTGNVTFS
CSEPPIVPITFVNSSGSYLLLPGTPRIDGLSVSFQFRTWNKDGVLLSTELSEGSGTLLLS
LEGGVLRLLIQKMSERITEILTGSNLDDGLWHAVSISARRNRITLTLDDDAASPAQDTAR
VQIYSGSSYYFGGCPDHLTESQCLSPVQAFQGCMRLIFIDNQPKDLISVQQGSLGNFSGL
HIDLCSIKDRCLSSYCEHGGSCSQSWSTFHCNCRDTGYTGATCHNSMHEQSCEVHRHQGN
SAGLFYIDSDGSGPLAPLQVHCSITKIWKTVQHNNAELTPVQGYVHEKSDIMTLDYSVSM
EQLEALIDSSEHCEQEVAYHRRRSHLNSTADGAPYIWWIGRSKERFPYWGGSPPGLQQCE
CGLDRSCMDIPHVCNCDLDKDEWTNYTGLISFKDHLPVTQIVITGTNRSNSEAAWRVGPL
RCYGDRHFWNAVTFDTEASYLHFPTFQAEYSTDISFFFKTTDLSGVFLENFSMKVFIRLE
MSSPSEVTFAVDVGNGPVELIVQSPSPLNDNQWHHVRAERNLKETSLQVDNLPRSTRETT
EQGHLRLQLNSQLLVGGTSSRQKGFLGCIRSLRWNGQKLNLEERAKTTSGVRPGCPGHCS
SYGSICHNGGRCVEKHNGYLCDCTNSPYEGPFCKKEVSAVFEAGTSVTYTFQEPYPVTKD
LSLSSSAIYAGATPSKENIALSFMTGWVPSLLLFINYSSQDFLAVLLCKNGDLQVRYQLS
KEDTHVFTIDVQNFANRRMHHLKINREGRELTMQVDQHPQHSCSFSLEASLRTARSLTLG
KVTENLGLDSEVARANTLGFLGCLSSVQYNHIAPLKAALRHTTAAPVTVQGTLAESCGVN
SHAVTTXXXXXXXSFGKVDEREPLTNAVQSDSAIIGGVIALVIFIIACSIAVMIRFLYQH
KQPLRTSQMKKEYPEDLASAFRNEIDLQDTANERKREYFI
Download sequence
Identical sequences ENSOPRP00000000660 ENSOPRP00000000660

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]