SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000001078 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000001078
Domain Number 1 Region: 541-595
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000446
Family Laminin-type module 0.0000889
Further Details:      
 
Domain Number 2 Region: 439-489
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000725
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 3 Region: 1-48
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000642
Family Laminin-type module 0.075
Further Details:      
 
Domain Number 4 Region: 648-698
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000151
Family Laminin-type module 0.016
Further Details:      
 
Domain Number 5 Region: 597-645
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000137
Family Laminin-type module 0.0004
Further Details:      
 
Domain Number 6 Region: 57-115
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000711
Family Laminin-type module 0.0098
Further Details:      
 
Domain Number 7 Region: 113-153
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000391
Family Laminin-type module 0.0071
Further Details:      
 
Domain Number 8 Region: 696-741
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000167
Family Laminin-type module 0.014
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000001078
Domain Number - Region: 487-543
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00148
Family Laminin-type module 0.00084
Further Details:      
 
Domain Number - Region: 1012-1258
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00194
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.013
Further Details:      
 
Domain Number - Region: 792-993
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0051
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.011
Further Details:      
 
Domain Number - Region: 401-441
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0363
Family Laminin-type module 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000001078   Gene: ENSOPRG00000001131   Transcript: ENSOPRT00000001168
Sequence length 1320
Comment pep:novel genescaffold:pika:GeneScaffold_2215:3841:21005:1 gene:ENSOPRG00000001131 transcript:ENSOPRT00000001168 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CKCNGHASECVKNELGQLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLLCDCN
GKSQQCTFDQELFRQTGSGFRCLRCEDNTDGAHCEKCKEGFHRPRGGDRCLPCDCSPTGS
LSTQCDTSGHCSCKPGVTGDKCDRCQPGFHSLTSSGCXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGYLDDVTLATARLGPGVPVNWVESCTCPVGYGGQFCETCL
PGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGPQCERCGDGYYGDSTTG
SADCQPCACRGVSSCDMLPETKEVVCTICHTDTGKRCELCDDGYFGDPLGRNGPVRLCRP
CQCSDNVDPNAVGNCNRSTGECLKCIYNTAGFYCDRCRDGFFGNPLAPSPADKCRACNCN
SYGTVRQHGGCDPVTGQCECLSHVAGRDCGTCEPGFYNLQSGRGCQRCDCHALGSTDGQC
DIRTGQCECQPGVTGQRCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCREDGGCECRPGF
VGSRCDQCEENYFYNRSWPGCQECPACYRLVKDKVAEHRAKLQELENLVSSLGTWDVVTD
QDFEYRLKEVERELTDLLPEAQDVKDVDQNLLSRLQRVNSTLSSQISRLQNIRKTITETA
GLAEQARSRVQSTERLIEIASRELERAKVAAANVSITQPEATGDPNNMTLLAEEARRLAE
RHKQEADDIVRVATTANDTSAEAFALLLRTLAGENQTALEIQELNRKYEQARNLSRDLEA
QAARVHEEAKRAGDKAVEIYASVAQLSPVDSEALENEARRIQKEAEDLDRLLDQKLQDYE
DLRDDMRAKELEVQTLLEKGRTEQQTADQLLARADAAKALAEEAAKRGRNTLQEANDILN
NLNDFDRRVNDNKTAAEEALRRVPAINRTIAEANEKTQGAQLALGNAAADATEAKHRAHE
AERLASAVQKNATSTKAEAERTFAEVTDLDQEVSDMLKQLQDAEQELKQKQEDAEQDMMM
AGMASQAAQEAEINARKVKNSATSLLGIINDLLQQLGQLDTVLNKLNELEGSLSRAKGEL
EASGLLRKVSDLEDEARKQEAALLGYDRDIKEVLQDIQNLEDIRRSLPSGCFNTPSIEKP
Download sequence
Identical sequences ENSOPRP00000001078 ENSOPRP00000001078

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]