SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000002104 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000002104
Domain Number 1 Region: 2-99
Classification Level Classification E-value
Superfamily Immunoglobulin 4.22e-17
Family I set domains 0.022
Further Details:      
 
Domain Number 2 Region: 144-195
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000155
Family EGF-type module 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000002104   Gene: ENSOPRG00000002272   Transcript: ENSOPRT00000002275
Sequence length 614
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_3213:167694:330655:1 gene:ENSOPRG00000002272 transcript:ENSOPRT00000002275 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LPPRLKEMKSQESSAGSRLVLRCETSSEYSSLRFKWFKNGNELNRKNKPQNIKIQKKPGK
SELRINKASLADSGEYMCKVISKLGNDSASANITIVESNEISTGIPASTERAYVSSETPI
RISVSTEGANTSSSTSTSTTGTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQP
GFTGARCTENVPMKVQNQERPCVEPFPEAEELYQKRVLTITGICIALLVVGIMCVVAYCK
TKKQRKKLHDRLRQSLRSERNNMVNIANGPHHPNPPPENVQLVNQYVSKNVISSEHIVER
EAETSFSTSHYTSTAHHSTTVTQTPSHSLSNGHTESIPPESHSVSMMSSVDNSRHSSSPG
GPRGRLNGLGGPRECNSFLRHARETPDSYRDSPHSERYVSAMTTPARMSPVDFLTPSSPK
SPPSEMSPPVSSMTVSMPSMAVSPFVEEERPLLLVTPPRLREKKYDHHPQQFNSFHHNPA
HESNSLPPSPLRIVEDEEYETTQEYEPAQEPVKKLANSRRAKRTKPNGHIANRSEMDSHT
SSESSNSESETEDERVGEDTPFLGIQNPLAASPEAAPAFRXXXXXXXXXXXXXXXXEIQA
RLSSVIANQDPIAV
Download sequence
Identical sequences ENSOPRP00000002104 ENSOPRP00000002104

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]