SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000002345 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000002345
Domain Number 1 Region: 122-295
Classification Level Classification E-value
Superfamily vWA-like 2.58e-36
Family Integrin A (or I) domain 0.0000467
Further Details:      
 
Domain Number 2 Region: 408-452
Classification Level Classification E-value
Superfamily Integrin domains 0.00000000000785
Family Integrin domains 0.0025
Further Details:      
 
Domain Number 3 Region: 535-575
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000837
Family Integrin beta EGF-like domains 0.00098
Further Details:      
 
Domain Number 4 Region: 579-618
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000162
Family Integrin beta EGF-like domains 0.014
Further Details:      
 
Domain Number 5 Region: 23-51
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000392
Family Plexin repeat 0.0036
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000002345
Domain Number - Region: 457-484
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00809
Family Integrin beta EGF-like domains 0.033
Further Details:      
 
Domain Number - Region: 500-535
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0212
Family Integrin beta EGF-like domains 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000002345   Gene: ENSOPRG00000002533   Transcript: ENSOPRT00000002538
Sequence length 769
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_3336:4089:23239:-1 gene:ENSOPRG00000002533 transcript:ENSOPRT00000002538 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence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Download sequence
Identical sequences ENSOPRP00000002345 ENSOPRP00000002345

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]