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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000002555

Domain assignment for ENSOPRP00000002555 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000002555
Domain Number 1 Region: 2905-3070
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.66e-35
Family Laminin G-like module 0.00000624
Further Details:      
 
Domain Number 2 Region: 2295-2481
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.15e-33
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 3 Region: 2478-2672
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.87e-30
Family Laminin G-like module 0.0087
Further Details:      
 
Domain Number 4 Region: 2717-2846
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.19e-29
Family Laminin G-like module 0.0000954
Further Details:      
 
Domain Number 5 Region: 2126-2295
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.45e-28
Family Laminin G-like module 0.0016
Further Details:      
 
Domain Number 6 Region: 851-905
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000112
Family Laminin-type module 0.0011
Further Details:      
 
Domain Number 7 Region: 1405-1456
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000145
Family Laminin-type module 0.0061
Further Details:      
 
Domain Number 8 Region: 802-853
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000126
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 9 Region: 1046-1094
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000215
Family Laminin-type module 0.018
Further Details:      
 
Domain Number 10 Region: 745-796
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000279
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 11 Region: 904-950
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000053
Family Laminin-type module 0.0036
Further Details:      
 
Domain Number 12 Region: 1463-1513
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000146
Family Laminin-type module 0.03
Further Details:      
 
Domain Number 13 Region: 400-459
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000153
Family Laminin-type module 0.06
Further Details:      
 
Domain Number 14 Region: 1511-1558
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000276
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 15 Region: 81-162
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0000119
Family APC10-like 0.069
Further Details:      
 
Domain Number 16 Region: 1000-1048
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000145
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 17 Region: 707-747
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000218
Family Laminin-type module 0.081
Further Details:      
 
Domain Number 18 Region: 330-402
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000307
Family Laminin-type module 0.024
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000002555
Domain Number - Region: 478-508
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000809
Family Laminin-type module 0.011
Further Details:      
 
Domain Number - Region: 953-1002
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00142
Family Laminin-type module 0.015
Further Details:      
 
Domain Number - Region: 1362-1387
Classification Level Classification E-value
Superfamily EGF/Laminin 0.01
Family Laminin-type module 0.05
Further Details:      
 
Domain Number - Region: 1112-1154
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0142
Family Laminin-type module 0.037
Further Details:      
 
Domain Number - Region: 1778-1857
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0528
Family Spectrin repeat 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000002555   Gene: ENSOPRG00000002706   Transcript: ENSOPRT00000002775
Sequence length 3074
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_819:8208:155425:-1 gene:ENSOPRG00000002706 transcript:ENSOPRT00000002775 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRGVGAGSALLAALLCVAVRGQQRGLFPAILNLASNAHISTNATCGERGPEMFCKLVEHV
PGRPLRNAQCRICDGNSANPKERHPISNAIDGTNNWWQSPSIQNGRDYHWVTITLDLRQV
FQVAYVIIKAANSPRPGNWILERSLDGTTFSPWQYYAVSDTECLTRYNITPTRGPPTYRA
DDEVICTSYYSRLVPLEHGIHTSLINGRPSADDLSPKLLEFTSARYFPLRLQRIRTLNAD
LMTLSHREPKELDPIVTRRYYYSIKDISVGGMCICNGHASSCPWDETTKXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNCHNKATDCYYDEHVASQKRSLNAAGQFTG
GGVCINCLQNTMGINCETCLDGYYRPHKVSPYENEPCHPCDCDPVGSLSSVCIKDDLHSE
IRNGKWPGQCVCKEGYAGEECDRCQFGYRGYPNCVRCECSPAGSVNDDPXXXXXXXXENV
EGKDCDRCKPGFYNLNKRNPQGCTECFCFGVSDVCDSLSWPVGQVKDMSGWLVTDLVSPS
VIQSQQDALGGRHRVSINNTAVMKRLASQYYWAAPEAYLGNKLTAFGGFLKYTVSYDIPV
EATDTTLMAHADVIIKGNGLTVSTQAEGLSLQPYEEYLNVVRLVPENFWDFSSKREIDRD
QLMTVLANVTHLLIRANYNSAKTALYRLDSVSLDTASPNAIDLAVATDVEHCECPQGYTG
TSCESCLPGYYRVDGILFGGICQPCECHGHAVECDIHGVCSACAHNTTGDHCEQCQPGFY
GTPSRGTPGDCQPCACPLSTASNNFSPTCHLVDEDIVCDQCAPGYAGDWCERCADGYYGN
PTVPGEACVPCECNGNVDPSEPGHCDPVTGECLKCLRNTTGTHCERCADGFYGDAVAAKN
CRACNCHEKGSHSGMCHPETGVCDCKPHVTGQQCDQCLPGYYGLALGHGCLACGCSTAGS
TSDDCTDEGRCRCAPGVAGDKCDRCSHGFYAFQNGGCTACDCAHTHNTCDPRSGTCICPP
HTRGLQCEECEDGYWGRDLERGCQACNCSGEGSTSYQCDMLSGQCQCKSAFDGRSCDRCS
LGYRDFPDCVPCDCDLRGTLADTCDLEQGLCSCAEETATCSCKENVFGLQCSECRAGTFA
LHADDPLGCRPCFCFGLSHLCSELQGYVRTPVMLDSDQPLLRVVSQSNLRGTMEGVHYQA
PDILLDAVTARRHIQAEPFYWWLPEQFQGDQLLAYGGKLKYSVAFYSSDGIGTSNLEPQV
LIKGGRTRKQVIYMDAPAPENGVRQQQEVEMKENFWKYFNSVSEEPVTRSDFMSVLSNIE
YILVKASYGQGLQQSRISNISLEVGRKADALQPHGEVASLLEKCVCPLGTAGFSCQDCAP
GYHRGRLPEGAGRGPRPLLAPCVPCSCNNHSDMCDPETGKCLNCSDHTAGDHCDVCAPGY
YGKVIGLADDCSPCTCPYRQPASFSPTCVLEADGDLRCDACAPGYEGQYCERCSSGYYGN
PRMLGGRCHKCDCSPHGSVHGDCDRESGQCICRPGATGLRCEQCEPRHILLESNCVSCDD
ECTGVLLDDLDNIGDAILSVNLTGAFPLPYGILSNLKNTTQXXXKSFLKENTRKELASTE
LEDVAEQTEGLQQELTRVLTTSQQVNKATERILNASQDLATFIGRLQVDIRDILEKAATL
NQTRDEDFPLPNSTLQHMQRNLTALLEVIQNRHFTQLHQNASLELKAAEDLLLQIQKAFQ
KPQEDLEVLTSKASSLLSKHHNELQVAEELVRQAEAKTKESSHLLLIVKANLREFKDKKR
HVREEQNLTSELTTQGRRLMDAATVHADTAQNTLAQLENLQDELLLWATKIRHHVDDLVM
QMSKRRALDLVYRAEDHAAELQGLAGVLDSGLEKVTHVSLNATSAVHVHSNIQSLIEDAD
RLARDARRTVAEMSLLSESIVSSGKAALQRGSQFLKEGSDLSRKHQGITLKLSERKQAAK
RFHENADNITRQTRKSLLKLRAIPAGVRDKGSKTKELATSANQTAVSTLKDVVGLSQKVF
NTSTGLSRMNATLQETHDLLRDSTMTTLAERKVKDVNSTALDRKPLKILEELNRXXXXXX
XXXXXXXXXXXXIKVAVSADRDCIRAYQPQISSTNYNSLTLNVKTGEPDNLLFYLGSSTS
ADFLAVEMRRGKVAFLWDMGSGSARLEFPDFPIDNNEWHSIHVTRFGNVGSLSVKEVSSS
EKAPVKTSKSPGMANVLDINNSTLMFVGGLGGQIKKAPAVKVTHFKGCMGEAFLNGKSIG
LWNYIEREGQCQGCFGSPQEEDASFHFDGSGHSVVEKTLRATVTQIIMLFNTFSPNGLLL
YLASNGTKDFLSIELMHGRVKVTIDLGSGPLVLTTDRRYNNGTWYKIAFQRNRKQGLLAV
IDAYNSSDKETKQGEAPGVSSDLNRLDKDPIYVGGLPRSRVTRKGITSKNYVGCIKNLEI
SRSTFDLLRNSYGVRKGCVLEPIRSVSFLTGGYIELPPKSLSPEVEMLVTFATTNSTGVI
LAAIGKDAQRQGHWQVHVPFFSIMLIDGHVEVHVSPGDGTSLRKALLHPPSGTYSDGQAH
SISLVRSRRIITVQVDEAHPVEMRLGPFADSRTINVSTLYLGGVPEDEDMALLKTRSSFH
GCIENLVFNMKLLDFTGAVGYEKVDLGSCLLSERPPLALHREDSEPLPESLAFLSAGQCT
VEPALEYVPGAHQFGLSQNSHFVLPFDQLAVRRRLLVQLSIRTLASSGLIYHMAHQNQVD
YATLQLHGGRLQFTFDLGKGRTKVSHPTLLNDGKWHMVKTEYIKRKGVITVDGHESPSVT
MVGDAITLDVEGKLYLGGLPSEYRARNIGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXKEGYKVRSDVNITLEFRTSSKNGVLLGISSAKVDAVGL
ELVQGKLLFHVNNGAGRITATYEPRPGGTLCDGKWHVLQANKSKHRITLIVDGHAVGAES
AHTQSTSADTNNPIYVGGYPAGVKQNCLSSQTSFRGCLRGLRLSKGTWQVQSFDFSRAFD
LQGVFPHSCPGPEP
Download sequence
Identical sequences ENSOPRP00000002555 ENSOPRP00000002555

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.