SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000002711

Domain assignment for ENSOPRP00000002711 from Ochotona princeps 76

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSOPRP00000002711
Domain Number 1 Region: 4155-4355
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.36e-37
Family Laminin G-like module 0.00081
Further Details:      
 
Domain Number 2 Region: 3901-4091
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.43e-37
Family Laminin G-like module 0.00075
Further Details:      
 
Domain Number 3 Region: 3630-3839
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.13e-33
Family Laminin G-like module 0.0011
Further Details:      
 
Domain Number 4 Region: 404-489
Classification Level Classification E-value
Superfamily Immunoglobulin 1.2e-21
Family I set domains 0.011
Further Details:      
 
Domain Number 5 Region: 1946-2034
Classification Level Classification E-value
Superfamily Immunoglobulin 2.54e-19
Family I set domains 0.015
Further Details:      
 
Domain Number 6 Region: 3565-3652
Classification Level Classification E-value
Superfamily Immunoglobulin 3.66e-19
Family I set domains 0.017
Further Details:      
 
Domain Number 7 Region: 3284-3375
Classification Level Classification E-value
Superfamily Immunoglobulin 1.67e-18
Family I set domains 0.019
Further Details:      
 
Domain Number 8 Region: 3487-3574
Classification Level Classification E-value
Superfamily Immunoglobulin 1.84e-18
Family I set domains 0.02
Further Details:      
 
Domain Number 9 Region: 3203-3297
Classification Level Classification E-value
Superfamily Immunoglobulin 2.12e-18
Family I set domains 0.013
Further Details:      
 
Domain Number 10 Region: 2041-2128
Classification Level Classification E-value
Superfamily Immunoglobulin 4.29e-18
Family I set domains 0.033
Further Details:      
 
Domain Number 11 Region: 2621-2712
Classification Level Classification E-value
Superfamily Immunoglobulin 7.73e-18
Family I set domains 0.027
Further Details:      
 
Domain Number 12 Region: 3101-3194
Classification Level Classification E-value
Superfamily Immunoglobulin 3.4e-17
Family I set domains 0.0096
Further Details:      
 
Domain Number 13 Region: 1674-1762
Classification Level Classification E-value
Superfamily Immunoglobulin 5.52e-17
Family I set domains 0.013
Further Details:      
 
Domain Number 14 Region: 2429-2519
Classification Level Classification E-value
Superfamily Immunoglobulin 6.75e-17
Family I set domains 0.033
Further Details:      
 
Domain Number 15 Region: 3015-3109
Classification Level Classification E-value
Superfamily Immunoglobulin 8.08e-16
Family I set domains 0.029
Further Details:      
 
Domain Number 16 Region: 2920-3002
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000126
Family I set domains 0.047
Further Details:      
 
Domain Number 17 Region: 2723-2804
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000025
Family I set domains 0.064
Further Details:      
 
Domain Number 18 Region: 3390-3483
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000031
Family I set domains 0.015
Further Details:      
 
Domain Number 19 Region: 2530-2613
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000363
Family I set domains 0.011
Further Details:      
 
Domain Number 20 Region: 2820-2906
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000697
Family I set domains 0.029
Further Details:      
 
Domain Number 21 Region: 2237-2318
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000153
Family I set domains 0.033
Further Details:      
 
Domain Number 22 Region: 2147-2239
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000321
Family V set domains (antibody variable domain-like) 0.067
Further Details:      
 
Domain Number 23 Region: 2337-2419
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000489
Family I set domains 0.089
Further Details:      
 
Domain Number 24 Region: 1562-1614
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000502
Family Laminin-type module 0.0087
Further Details:      
 
Domain Number 25 Region: 323-359
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000537
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 26 Region: 282-318
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000668
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 27 Region: 366-409
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000117
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 28 Region: 1158-1210
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000184
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 29 Region: 763-815
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000193
Family Laminin-type module 0.0062
Further Details:      
 
Domain Number 30 Region: 194-234
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000641
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 31 Region: 823-869
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000149
Family Laminin-type module 0.031
Further Details:      
 
Domain Number 32 Region: 3833-3874
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000288
Family EGF-type module 0.015
Further Details:      
 
Domain Number 33 Region: 4097-4140
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000163
Family EGF-type module 0.01
Further Details:      
 
Domain Number 34 Region: 1218-1263
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000167
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 35 Region: 1864-1910
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000475
Family I set domains 0.084
Further Details:      
 
Domain Number 36 Region: 1274-1321
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000307
Family Laminin-type module 0.0054
Further Details:      
 
Domain Number 37 Region: 1634-1669
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000576
Family Laminin-type module 0.03
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000002711
Domain Number - Region: 889-925
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000475
Family Laminin-type module 0.025
Further Details:      
 
Domain Number - Region: 1527-1564
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00347
Family EGF-type module 0.091
Further Details:      
 
Domain Number - Region: 1122-1160
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0119
Family Laminin-type module 0.094
Further Details:      
 
Domain Number - Region: 724-765
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0369
Family EGF-type module 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000002711   Gene: ENSOPRG00000002779   Transcript: ENSOPRT00000002942
Sequence length 4383
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4788:42866:142474:-1 gene:ENSOPRG00000002779 transcript:ENSOPRT00000002942 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MGRRAAGTLLLALLLHGRLLAVVHGLRAYEGLSLPEDTETVTEGRAGWSYSYLSDDEDLL
ADDASGDGLGSGELGSGDFQMVYFRALVNFTRSIEYSPQLEDAGSKEFREVSDAVVDKLE
LEYSKIPGDQVVSVVFIKELDGWVFVELDVGSEGNADGAQIQDVLHRVVASGAIAPYSTS
LQGFQFRRLGTVPQVPRVCTETEFACHSHNECVPLEYRCDRRPDCRDMSDELNCDPVPEH
SSVPPFMVQTPSLPPEPETTTTPRPPDIAIHQPLFPSPGRPELCRPHEAACHSGQCIPKD
YFCDGQDDCKDGSDELNCGPSPPCEPNEFPCGNGHCALKLWRCDGDFDCEDHTDEANCPA
KRPEEVCGPTQFRCVSTNTCIPASFHCDEESDCADRSDEFGCMPPQVVTPPQESIQASRG
QTVTLTCVATGVPTPIINWRLNWGHIPSHPRVTMTSEGGRGTLTIRDVKEADQGAYTCEA
MNARGMVFGIPDGVLELLPQRGPCPDGHFYLESSASCLPCFCFGVTNVCQSSRRFRDHIL
LRFDQPNDFKGVNVTMPTQPGMPPLSSTQMQIDTTLQEFQLVDLSRRFLVHDSFWALPEQ
FLGNKVDSYGGSLRYKVRYELARGTLEPVQRPDVVLVGAGYRLLSRGHTPTQPGALNQRQ
VQLSEEHWVHESGRPVQRAEMLQVLQSLEAVLIQTVYNAKMASVGLSDISMDTTVTHTTS
HGRAHSVEECRCPIGYSGLSCESCDTHFTRVPGGPYLGTCSGCHCNGHASSCDPVYGYCL
NCQHNTEGPQCNKCKAGFFGDATQATATACRPCPCPYIDASRRFSDTCFLDTDGQATCDA
CAPGYTGRRCERCAPGYEGNPIQPLGKCRLIHHFKVLQCNEKGSLQISETCQCKNNVVGR
LCNECADGSFHLSKQNPDGCLKCFCMGVSRQCSSSSWSRAQVLGASEEPSQFSLTNAAGT
YTTSEGIASPAAGELLFSSFHSLLPGPYFWSLPLRFRGDKVTSYGGELRFTVTQQPQPGS
PPLHRQPLVVLQGNSITLEHHTSQEPVPGQPSTFTVPFREQAWQRPDGQPATREHLLMAL
AGIDALLIRASYSQQPAESRLSGISMDVAVPENTGQDLALEVEQCTCPSGYRGPSCQDCD
TGYTRMPSGLYLGTCERCSCHGHSEVCEPETGACQGCQHHTEGPRCEQCQPGYYGDAQQG
TPQDCQPCPCYGTPAAGQAAHTCFLDTDGHPTCDACSPSHSGRHCERCAPGYYGNPSQGQ
PCQRDSQVPGSIVCSCDPQGSISSQCDASGQCQCKAQVEGLTCSQCRPHYFHLSASNPDG
CLPCFCMGVTQQCASSSYTRHLISTYFAPGNFQGFALVNPQRNSRLTGGFTVEPTSDGAQ
LSFSNFAQLGQEPFYWQLPETYQGDKVAAYGGKLRYTLSYVSGPQGSPLSDPDIQITGNN
IMLVASQPALQGPGRKSYEIIFREEFWRRPDGQPATREHLLMALADLDEILVRATFSSVP
LAASISAVSLEVAQPGPSDGPRALEVEECRCPPGYIGLSCQDCAPGYTRTENGLYLGHCE
LCECNGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQPCACPLTNPE
NXXXXXXXXXXXXXXRCTACEPGYTGQYCEQCAPGYVGNPNVQGGRCLPQADQAPLVVQV
HPARSIVPQGGSHSLRCQVSGSPPHYFYWSREDGRPIPSSTQQRHQGSELHFPSVQPSDA
GVYICTCRNLHHVNTSRAELLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG
TSTAPMVSIHPPQLTVQPGQLAEFRCSATGNPTPTLEWIGGPGGQLPRAQVSGGILRCAV
EPDQTYCANSAQHVARAVLHVHGGSGPRVQVSPERTQVHEGHTVRLYCRAAGVPSATITW
KKEGGSLPPQARSERTDIATLLIPAITAADAGFYLCVATSPAGTAQARIQVVVLTASGDH
SPPPVRIESSSPSVTEGQTLDLNCVVAGSAHAQITWYRRGSSLPPHAQVHGSRLRLPQVS
PADSGEYVCRVENGAGPKEDTITISVLHSTHTSPNNAPAAGSTQPIRIESSSSHVAEGQT
LDLNCVVPGQAHAQVTWYRRGGSLPTRHQTHGSLLRLHQVSPADSGEYVCRVVLGSEPLE
TSVRVSIEASGSVPGPVPPVRIESSSSTVAEGQTLDLSCVVAGQAHAPVTWYKRGGSLPA
RHQVRGSRLYIFQISPADAGEYVCRASNGVEASITVRVTRTRGPSNVNSSGGTQPIRIES
SSSHVAEGQTLDLNCVVPGQAHAQVTWHRRGGSLPARHQTHGSLLRLHQVSPADSGEYVC
RVVGGSVPLESSVLVTIEPESSVPALGVTPPVRIESSSSHVAEGQTLDLNCLVAGQAHAQ
ITWHKRGGSLPAQHQVHGSRLRLPQVTPADSGEYVCRVVSSSGTQEASVLVTIQQRPGPS
HPQGVVYPVRIESSSTSLANGHILDLNCIVASQAPHTITWYKRGSSLPSRHQIVGSRLRI
PQVTPADSGEYVCHVSNGIGSQETSLIVTIQGSGTSRVPSVSPPIRIESSSPTVVEGQTL
DLNCVVAGQTQATITWYKRGGSLPSQHQTHGSHLRLHQLSVADSGEYVCRANNNIDAQEA
SIMVSVSPRPSNPSAPGDATPIRIESSSSHVAEGQTLDLNCVVPGQAHAQVTWYKRGGSL
PTHHQTHGSTLRLYQVSPADSGQYVCRVLGTSGPLEASVLVTIEASDAGAVRVPAQGGTP
PIRIETSSPRVAEGQTLDLSCVVPGQAHAQVTWHRRGGSLPAQHQVHGHILRLNQVSPAD
SGEYTCRVVGSSGVLEASVLVSIEPASPAPIPAPGLAQPIYIEASSSHVAEGQTLDLNCV
VPGQAHAQVTWYKRGGSLPAQHQTHGSILRLHHVSPADSGEYVCRVTGSSGPEQEASFTV
TVPPSEGSSYRLRSPVISIDPPSSTVQQGQDASFKCLIHDGATPINLEWKTRNQELEDNV
HISPNGSVITIVGTRPSNHGAYRCVASNAYGVAQSVVNLNVHGPPMVSVLPEGSVRVKAG
KDVTLECVSSGEPRSAPRWTRVGYPARLDPWTLGMVDSHAVLKISSVKPSDAGTYVCLAQ
NALGTAQKQVEVIVDMGTVAPGAPQAQVEEVELTVEAGHTATLRCSASGSPMPTIHWSKL
RAPLPWQHRLEGNTLIIPRVAQQDSGQYICNATSHLGHSEATVVLHVENPPYATIVPEHA
SVRAGETVQLQCLAHGTPPLTFQWSRVGSSLPGRATVSKERLHIEPAAPEDSGRYRCQVS
NKVGLAEAFVQVLVQGSSSTLPDTAVSAGAPPTVQITPQQETKSIGASVEFHCAVPSDRG
TQLRWIKEGGQLPPGHSMQDGVLRIQNLDQSCQGTYVCQAHGPWGQAQASAQLVVQALPS
VLINIRTSVQTVVVGHSVEFECLALGDPKPQVTWSKVGGRLRPGIMQSGNVIKIPHVELA
DAGQYRCTATNGAGTTQSHVLLLVQALPQISTPPEVRVPAGSAAVFPCMASGYPTPDITW
SKLDGSLPPDSRLENNMLMLPSVRPQDAGTYVCTATNRQGKVKAFAHLQVPERVVPYFTQ
TPYSFLPLPTIKDAYRKFEIKITFRPDSADGMLLYNGQKRTPGSSTNLANRQPDFISFGL
VGGRPEFRFDAGSGMATIRHPTPLALGQFHTVTLLRSLTQGSLTVGNLTPVNGTSQGKFQ
GLDLNEELYLGGYPDYAAIPKAGLSSGFVGCVRELRIQDEEIIFHDFNLTAHGISHCPTC
RDRPCQNGGQCHDSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGY
TCRCHLGRSGARCEEGVTVTTPSMSGSDSYLALPALTNTHHELRLDVEFKPLAPDGILLF
SGGKSGPVEDFVSLAMAGGHLEFRYELGSGLAILRSPEPLALGRWHRASAERLNKDGSLR
INGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLD
LTYSFLGSRGIGQCYDSSPCERQPCQNGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQ
LHEPCLHGGTCQGTHCLCPPGFSGPRCQQGPGHGTAESDWHLEGSGGSDAPGQYGAYFYD
GGFLALPGHIFSRSLPEVPETIELEVRTSTASGLLLWQGVEIGKISRGKDFVSLGLQDGH
LVFSYQLGSGEARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGQSPGPNVAVNT
KGNIYVGGAPDVAALTGGRFSSGITGCIKNLVLRSAQPGGPPPQPLDLQHRALAGANTRP
CPS
Download sequence
Identical sequences ENSOPRP00000002711 ENSOPRP00000002711

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.