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Domain assignment for ENSOPRP00000003408 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000003408
Domain Number 1 Region: 609-672
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000756
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 2 Region: 537-583
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000288
Family TSP-1 type 1 repeat 0.00051
Further Details:      
 
Domain Number 3 Region: 664-720
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000472
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 4 Region: 63-110
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000131
Family TSP-1 type 1 repeat 0.0024
Further Details:      
 
Domain Number 5 Region: 115-156
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000417
Family LDL receptor-like module 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000003408   Gene: ENSOPRG00000003680   Transcript: ENSOPRT00000003707
Sequence length 881
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4039:277154:366821:1 gene:ENSOPRG00000003680 transcript:ENSOPRT00000003707 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GRGRWRRRLPAGLFLFLTSSRLTEENSVLSSARSVCLNMKASLFILMGFMGEFESFSSAS
SPINCQWGSYGSWSECSGCTKTQTRRRPLAVYGQYGGHPCTGDAFETQPCEPTRGCPTEE
GCGDRFRCFSGQCISKSLVCNGDSDCEEDSADEDKCEDSGGRPSCDIDKPPPNIELTGEG
YNALTGQFTRKIINTKSFGGQCRKVFSGDGKQYYRLSGNILSYTFQVKMNNDFNYEFYNS
SWSYVKHTSADSTSSNRKRFFISSSSSSSNSHAIYDSEIHKKKSYQLMVVQNTVEVAQFR
NNNPDFLQLAEPFWKELSQLPSLYEYSAYRRLINLYGTHYLQSGSLGGEYRVLFYLDSEK
LKQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNNILRGIPLVVRGGDT
GLLAGLNWLDLNNPAGNRRRYSSWAESVTQVPSVIKQKXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIDGG
WSCWSPWGSCVQGKKTRTRVCDNPAPSAGGKSCIGETTESRQCEDEELQHLRLLEPHCFP
LSLAPTEFCPSPPPLKDGFVQDEGTTFPVGKNIVYTCNEGYSLIGDPVARCGEDLQWLVG
QMHCQKIACVLPVLENGVQSHPHKPFYAVGDKVTFSCLGGMSLQGPSTFLCGSSLKWNPE
MKNVQCVQKDSPLAQEVPECQRWEKLQDSTCVCKMPYECGSSLDVCAREERRKRTLALTV
CKLHVLHCQGKNYTLTNRDSCHVPVAAQKPCSACPLWEKCDAQSGNCVCREALECQDEGF
RVCVEVNGKEQTMSECEAGVLRCRGQSLSVTSIEPCAAEGL
Download sequence
Identical sequences ENSOPRP00000003408 ENSOPRP00000003408

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