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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000003932

Domain assignment for ENSOPRP00000003932 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000003932
Domain Number 1 Region: 3865-4052
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 1.96e-70
Family Fibrinogen C-terminal domain-like 0.00000906
Further Details:      
 
Domain Number 2 Region: 3602-3690
Classification Level Classification E-value
Superfamily Fibronectin type III 1.41e-20
Family Fibronectin type III 0.00012
Further Details:      
 
Domain Number 3 Region: 2709-2800
Classification Level Classification E-value
Superfamily Fibronectin type III 8.6e-19
Family Fibronectin type III 0.0015
Further Details:      
 
Domain Number 4 Region: 3690-3858
Classification Level Classification E-value
Superfamily Fibronectin type III 8.83e-19
Family Fibronectin type III 0.0000101
Further Details:      
 
Domain Number 5 Region: 2390-2475
Classification Level Classification E-value
Superfamily Fibronectin type III 1.28e-18
Family Fibronectin type III 0.0015
Further Details:      
 
Domain Number 6 Region: 2281-2364
Classification Level Classification E-value
Superfamily Fibronectin type III 1.97e-18
Family Fibronectin type III 0.0015
Further Details:      
 
Domain Number 7 Region: 2914-3005
Classification Level Classification E-value
Superfamily Fibronectin type III 2.62e-18
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 8 Region: 2074-2157
Classification Level Classification E-value
Superfamily Fibronectin type III 4.92e-18
Family Fibronectin type III 0.0015
Further Details:      
 
Domain Number 9 Region: 1562-1732
Classification Level Classification E-value
Superfamily Fibronectin type III 1.22e-17
Family Fibronectin type III 0.0025
Further Details:      
 
Domain Number 10 Region: 1348-1430
Classification Level Classification E-value
Superfamily Fibronectin type III 1.29e-16
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 11 Region: 3505-3598
Classification Level Classification E-value
Superfamily Fibronectin type III 2.4e-16
Family Fibronectin type III 0.00000351
Further Details:      
 
Domain Number 12 Region: 788-873
Classification Level Classification E-value
Superfamily Fibronectin type III 4.51e-16
Family Fibronectin type III 0.00054
Further Details:      
 
Domain Number 13 Region: 3210-3298
Classification Level Classification E-value
Superfamily Fibronectin type III 7.96e-16
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 14 Region: 1459-1541
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000156
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 15 Region: 2826-2908
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000232
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 16 Region: 3029-3111
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000232
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 17 Region: 1247-1337
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000353
Family Fibronectin type III 0.0017
Further Details:      
 
Domain Number 18 Region: 2501-2583
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000647
Family Fibronectin type III 0.0018
Further Details:      
 
Domain Number 19 Region: 3124-3213
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000013
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 20 Region: 2612-2694
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000213
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 21 Region: 2183-2265
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000216
Family Fibronectin type III 0.0019
Further Details:      
 
Domain Number 22 Region: 3306-3394
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000535
Family Fibronectin type III 0.0015
Further Details:      
 
Domain Number 23 Region: 1862-1944
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000713
Family Fibronectin type III 0.0022
Further Details:      
 
Domain Number 24 Region: 1755-1841
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000328
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 25 Region: 3422-3492
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000543
Family Fibronectin type III 0.002
Further Details:      
 
Domain Number 26 Region: 1960-2042
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000824
Family Fibronectin type III 0.0028
Further Details:      
 
Domain Number 27 Region: 744-803
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000018
Family Fibronectin type III 0.002
Further Details:      
 
Domain Number 28 Region: 1057-1121
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000869
Family Fibronectin type III 0.0046
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000003932
Domain Number - Region: 622-647
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00153
Family Integrin beta EGF-like domains 0.039
Further Details:      
 
Domain Number - Region: 253-277
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00246
Family Integrin beta EGF-like domains 0.034
Further Details:      
 
Domain Number - Region: 191-215
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00363
Family EGF-type module 0.057
Further Details:      
 
Domain Number - Region: 315-339
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00363
Family Integrin beta EGF-like domains 0.033
Further Details:      
 
Domain Number - Region: 346-369
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0165
Family Integrin beta EGF-like domains 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000003932   Gene: ENSOPRG00000004199   Transcript: ENSOPRT00000004267
Sequence length 4058
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_5134:351556:398004:-1 gene:ENSOPRG00000004199 transcript:ENSOPRT00000004267 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MMPALCPLSLRLALLVLLGTARAGPFSPRSNASLSAPRPPPQPGGRTVEAGGGSPSSQLY
EHTVEGGEKQVVFTHRINLPTSTGCGCPPGTEPPVPASEVQALRVRLEILEELVKGLKEQ
CAGGCCPAAAQAGTGQTDVRSLCSLHGVFDLSRCTCSCEPGWSGPTCSDPADPVMLPSTQ
PPASGSCPDDCNDQGRCVRGRCVCFPGYTGPSCSWPSCPGDCQGRGRCVQGVCVCRAGFS
GADCSQRSCPRGCSQRGRCEDGRCVCDPGYTGDDCGTRICPWDCGEGGRCVDGRCVCWPG
YAGEDCSTRTCPRDCRGRGRCEDGECICDPGYSGDDCGVQRCPGDCSQRGRCEDGRCVCW
PGYTGPDCGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGRCEN
GMCVCAGYSGEDCGVRSCPGDCRGRQCLDGRCVCDDGYSGQDCSVRRCPQDCNQRGTCQD
GVCACWEGYAGEDCGTRTCPSNCNRRGRCEDGRCVCDPGYTGPTCATRTCPADCRGRGRC
VQGVCLCHVGYGGEDCGREEPPASACPGGCGPRELCRAGQCVCVEGFHGPDCAIQTCPGD
CRGRGECREGSCVCQDGFAGEDCGEARVPSSASAYDQRGLAPGQEYQVTVRALRGTSWGP
PASKTITTMIDGPQDLRVVAVTPTTLDLSWLRPQAEVDRFVVSYVSAGNQRVRLEVPPEA
DRTTLTELMPGVEYVVTVHAERGRAVSYPSFVKATEEREAESRPELQPQPPRRPWANLTA
ELGRFRGTVQDLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLRVAWTAQSDTFIHFRLYLRV
PEWPGAHEELLPGDRRQALVPSPPPGSPYELSLHGVPPRGEPSAPITYQGIMEPEEEKPG
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHSDPSPAAAPRLGKLWVTDPTPDSLQL
SWTVPEGQFDSFMVQYRDLDGRPQVVPVEGPERSVVISPLDADHKYRFALFGMANKKRYG
PLTAEGTTAPERTEEPSQPASPEQPILGELTVTGVTPTTMHLSWTMPQGPFDSFVVQYKD
AQGQPRAVPVGGNENEVTIAGLEPDRKYKMNLYGLHGRQRVGPVSVVAKTATQEIVDKTP
APTEPSMEALETPEEPVLGELTVTGSSPDSLSLSWTVPQGHFDSFSIQYKDREGRPQVVR
VGGEEREVAVEGLEPGRKYKMNLYGLHEGRRVGPVSTVGVTAPQEEEEAPAATQPPLEPR
LGELTVTDVTSNSVDLSWMVPEGQFDSFMVQYEDRDGQPHVVPVAADQLKVTVPNLEPAR
TYKIDFYGVHGGQHVGPLSVVVMTDPLPPAPTTEATEPLVEPRLGELMVTGVTLDSVVLS
WTVPEGEFDSFVVQYKDRAGQPQVVPVPSDQREVTVPGLEPSRKYKFLLFGIQDGKRRDS
ASVEAKTPGDASPVAPPRLGELWITDPTLDSLRLHWTVPEGHFDSFMVQFKDKDGPQVVP
VEGHSRSVTVGPLDAGRKYRFLLYGLVGKKRHGPLSADGTTESPRAMEETGIKRTPKPQL
GEELQVTGVTPDSVDLSWTVSEGQFDSFVVQYKDRAGQPQVVPVAGSLREVRVPGLEPAR
RYKLLLYGLRDGKRVGPISTMAMTVPREEPEGEIKATQPPAPEPRLGKLRVEEATQHGLR
LSWSMIEGECDSFEVQYTDEDGQLNVATVGGDQSDITLTGLESDHRYLVTLYGYWDGQRV
GLGRIEAHTVAQEEEDQPLEPTTTTPKSPTKPRLGQLTVTDATPDSLSLSWTVPEGHFDH
FLVQYKNGDGQPKVVRVPGHEGEVTLSGLEPDHKYKVNLYGFHSGQSTGPVSAVGVTAAE
EETPSPTEPSTEAPVPSEETVLGELTVTGSSPDSLSLSWTVPQGHFDSFSIQYKDREGRP
QVVRIVGEEREVAVEGLEPGRKYKMNLYGLHEGRRVGPVSTVGVTAPEEEPPAVPLPKPH
LGQLTVTDATPDSLSLSWTVPEGHFDHFLVQYKNGDGQPKVVRVPGHEDEVTLSGLEPDH
KYKVNLYGFHSGQRTGPVSAVGVTAPREDEGTTLASTEAPTSTPEPPTKPRLGQLTVTDA
TPDSLSLSWTVPEGHFDHFLVQYKNGDGQPKVVRVPGHEDEVTLSGLEPDHKYKVNLYGF
HSGQRTGPVSAVGVTAAEEETPTPTEPSTEAPVPSEETVLGELMVTGSSPDSLSLSWTVP
QGHFDSFSIQYKDREGRPQVVRVGGEEREVAVEGLEPGRKYKMNLYGLHEGRRVGPVSTV
GVTDMQEIVDETPTPTEPSTEAPVPSVEPVLGELTVTGSSPDSLSLSWTVPQGHFDSFSI
QYKDREGRPQVVRVGGEEREVAVEGLESGRKYKMNLYGLHEGRRVGPVSTMGVTEDEPVT
TQATPTTTPEPPTKPRLGQLTVTDATPDSLSLSWTVPEGHFDHFLVQYKNGDGQPKVVRV
PGHEDEVTLSGLEPDHKYKVNLYGFHSGQRTGPVSAVGVTAAEEETPTPTEPSTEAPVPS
EEPVLGELTVTGSSPDSLSLSWTVPQGHFDSFSIQYKDREGRPQVVRVGGEEREVAVEGL
EPGRKYKMNLYGLHEGRRVGPVSTVGVTAPTTTPEPPTKPRLGQLTVTDATPDSLSLSWT
VPEGHFDHFLVQYKNGDGQPKVVRVPGHEDEVTLLGLEPDHKYKVNLYGFHSGQRTGPVS
AVGVTEEETPTPTEPSTEAPVPSEEPVLGELTVTGSSPDSLSLSWTVPQGHFDSFSIQYK
DREGRPQVVRVGGEEREVAVEGLEPGRKYKMNLYGLHEGRRVGPVSTVGVTAPLSPLPSE
LLGELEVVAVTSDTARLSWTVAQGPFDSFLVQYKDAQGQPKSVPVSTELREVTVSGLDPA
RKYKFLLFGLQDGKRHGPLSVEAKTIPDTKPPPRLGELTVTDMTPNSMSLSWTVSEGEFD
SFLVQHKDRDGQLQAVPVAGDQRELTIPDLEPGRKYRFLLYGLVGRKRLGPVSTDGATAP
LEKDQQPPALLGELAVTDETLDSLHLSWTVAQGTFDSFVLQYRDAERQPQAVPMAADQRE
ATVRGLAPGRKYKFLLYGLLGGKRLGPISALGMTVPKEETPSPEEDTPAPGIPEPREEPL
LGELVVTDTAPNSLRLSWSVARGPFDSFVVQYQDTDGQPQALLMDSDQNKVLISALEPST
TYRFFLYGLRPAPAGQTIGELGPRLSQLSVSDVTTSSLRLNWEAPPGAFDSFLLRFGVPT
PSTVEPHLRPLLQRELMVPGTRRSAVLRDLRPGTLYSLTLYGLRGPYKADSIQGTARTLS
PVLESPRDLQFTDVRETSAMVTWTPPPSRVDSFKVSYQLADGGEPQSVQVDGRAQAHQLQ
GLQSGTRYEVTVVSVRGFEESEPLTGFLTTVPDGPTQLRALNLTEGSTLLHWMPPRAPVD
KYNVRVTAPGAPPLQGSAPGSAVDYPLQDLMLHTNYTATVRGLRGPNFTSPASISFTTGM
KAPQDLEAKEVTPRTALLTWTEPQVPPTGYLLSFETPGGQTQEILLPGGLTSHKLLRLFP
STLYNVRLQAMWGDSLTPPLATSFTTGGLQVPFPRDCGEEMRNGAGSSRTTTIFLNGNRE
RPLDVFCDMETDGGGWLVFQRRMDGKTDFWRDWEDYAHGFGNLSGEFWLGNEALHSLTQA
GDYSMRVDLRAGDEAVFAQYDSFRVGSAADYYRLHLEGYHGTAGDAMSYHSGSVFSARDR
DPNNLLISCAVSYRGAWWYRNCHYANLNGLYGSTVDHQ
Download sequence
Identical sequences ENSOPRP00000003932 ENSOPRP00000003932

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.