SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000004163

Domain assignment for ENSOPRP00000004163 from Ochotona princeps 76

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSOPRP00000004163
Domain Number 1 Region: 60-173
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.5e-33
Family Spermadhesin, CUB domain 0.00071
Further Details:      
 
Domain Number 2 Region: 579-700
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.93e-30
Family Spermadhesin, CUB domain 0.00067
Further Details:      
 
Domain Number 3 Region: 1637-1740
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.93e-28
Family Spermadhesin, CUB domain 0.001
Further Details:      
 
Domain Number 4 Region: 1452-1567
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.96e-27
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 5 Region: 412-521
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.49e-26
Family Spermadhesin, CUB domain 0.0013
Further Details:      
 
Domain Number 6 Region: 933-1042
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.05e-21
Family Spermadhesin, CUB domain 0.0033
Further Details:      
 
Domain Number 7 Region: 1110-1184
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.02e-19
Family Spermadhesin, CUB domain 0.0014
Further Details:      
 
Domain Number 8 Region: 1989-2057
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.35e-19
Family Complement control module/SCR domain 0.00091
Further Details:      
 
Domain Number 9 Region: 2046-2115
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.26e-18
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 10 Region: 2229-2297
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.64e-18
Family Complement control module/SCR domain 0.00083
Further Details:      
 
Domain Number 11 Region: 2286-2356
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 2.64e-16
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 12 Region: 1321-1390
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000000000000222
Family Spermadhesin, CUB domain 0.0033
Further Details:      
 
Domain Number 13 Region: 2167-2223
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000528
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 14 Region: 2346-2410
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000634
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 15 Region: 6-74
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000167
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 16 Region: 524-594
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000032
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 17 Region: 2405-2472
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000378
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 18 Region: 1049-1112
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000513
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 19 Region: 1931-1993
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000723
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 20 Region: 804-866
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000000000733
Family Spermadhesin, CUB domain 0.0017
Further Details:      
 
Domain Number 21 Region: 699-755
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000243
Family Complement control module/SCR domain 0.0024
Further Details:      
 
Domain Number 22 Region: 1566-1632
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000432
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 23 Region: 1223-1281
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000661
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 24 Region: 239-275
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000000000759
Family Spermadhesin, CUB domain 0.0029
Further Details:      
 
Domain Number 25 Region: 1883-1936
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000025
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 26 Region: 2470-2520
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000032
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 27 Region: 2543-2593
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000306
Family Complement control module/SCR domain 0.003
Further Details:      
 
Domain Number 28 Region: 1742-1802
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000189
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 29 Region: 201-240
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000264
Family Complement control module/SCR domain 0.0028
Further Details:      
 
Domain Number 30 Region: 2587-2641
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000361
Family Complement control module/SCR domain 0.0034
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000004163
Domain Number - Region: 2104-2147
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000115
Family Complement control module/SCR domain 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004163   Gene: ENSOPRG00000004430   Transcript: ENSOPRT00000004522
Sequence length 2874
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4544:5260:508932:-1 gene:ENSOPRG00000004430 transcript:ENSOPRT00000004522 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
FGQNECHDPGIPVNGRRFGDRFLLGSSVSFHCDDGFVKTQGSESITCILQDGNVVWSSTV
PRCEAPCGGHLTAASGVILPPGWPGYYKDSLNCEWIIEAKPGHSIKITFDRFQTEVNYDT
LEVRDGPAASSPLIGEYHGTQAPQFLISTGNFMYLLFTTDNSRSSVGFLIHYEXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATVTFSCDPGYTLSEDEPLVCDRSHQWNHALPSCDALCG
GYIHGSSGTILSPGFPDFYPNSLNCTWTIEVPHGKXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECGASVRGN
EGTLLSPNFPSNYDNNHECIYKIETEAGKGIHLRARSFQLFEGDILKVYDGKDSSSRPLG
AFTKNELLGLTLNSTSNHLWLEFNTNGSDTDQGFQLTYTSFDLVKCEDPGIPNYGYRIRD
EGHFTDTVVLYSCNPGYAMHGSSTLTCLSGDRRVWDKPLPSCLAECGGQIHAATSGRILS
PGYPAPYDNNLHCTWIIEADPGKTISLHFIVFDTETAHDILKVWDGPVDSNILLKEWSGS
ALPGDIHSTFNSLTLQFDSDFFISKSGFSIQFSTSVASTCNDPGMPQNGTRYGDSREPGD
TITFQCDPGYQLQGQAKVTCVQQNNRFFWQPDPPTXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXFNMEPSYDFLHIYEGADSNSPLIGSFQGSQAPDRIE
SSANSLFLAFRSDASVGLSGFAIEFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPCGGQYTGSEGVVLSPNYPHNYTAGQIC
LYSITVPKEFVVFGQFAYFQTALNDLAELFDGTHPQARLLSSLSGSHSGETLPLATSNQI
LLRFSAKSGASARGFHFVYQAVPRTSDTQCSSVPEPRYGRRIGSEFSAGSVVRFECNPGY
LLQGSTAIRCQSVPNALAQWNDTIPSCVVPCSGNFTQRRGTILSPGYPEPYGNNLNCVWK
IIVTEGSGIQIQVISFATEQNWDSLEIHDGGDASAPRLGSFSXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXVGLAACQEPALPSNGIKIGGRYMVNDVLSFQCEPGYTLQGRS
HISCMPGTVRRWNYPSPLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
AHIQFLNFSTEANHDYLEIQNGPQHSSPMIGQFSGSDLPAALLSTTHETLIHFYSDHSQN
RQGFKLLYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXPCGYNVTAQNGTIYSPGFPDEYPILKDCTWLITVPPGHGVYINFTLL
QTEAVNDYIAVWDGPDQTAPPLGVFSGNTALETAHSSTSQVLLRFHSDFSNGGFFVLNFH
AFQLRKCQPPPAVPQAEMLTEDEDFEIGDFVKFQCRPGYTLLGSDTLTCKLSSSSQLQFE
GSLPTCEAQCPANEVRTESSGVILSPGYPGNYFNSQTCSWSIKVEPNFNITIFIETFQSE
KQFDALEIFDGSSGQSPLLVVLSGNHTEPSNFTSRSHQLYLRWSTDHATTKKGFKIRYAA
PYCSVTHTLKNGGIFNRTTGTVGSRVHYFCKPGYRMIGHSNATCLRDAGGVYRWSLMPLC
HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXVPCPAIETQLSEHVIWRLVAGSLNEYGAQVLLSCNPGYYLEGPRLLQCQANGTWNT
GEERPSCKVISCGSLSFPPNGNKIGTLTVFGATAIFTCNTGYTLVGSHVRECLANGLWSG
TETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCNPGFRLVGTSVRICLQDHKWSGQT
PVCVPITCGHPGNPAHGYTNGSEFNLNDVVNFTCNTGYLLQGASRAQCRSNGQWSSPLPT
CRVVNCSDPGFVDNAVRHGPRSFPESFQYGVGVMYHCKKGFYLLGSSXXXXXXXXXXXXX
XXXXXXISCGHPGVPANAVLIGERFTYGATVHYTCSGDHSLVGNSTRVCQEDSHWSGALP
HCTGNNPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCEVGYQLRGSAERTCLGNGSWSGLQ
PVCEAVSCGNPGTPANGMILSSDGVLFSSSVIYACWEGYKTAGLMTRHCTANGTWTGTAP
DCTIVSCGDPGTLANGIQFGIDFTFNKTVSYQCNPGYLMEPATGSTIRCTRDGSWNQSKP
LCKAVLCSQPPQVHNGRVEGSDFHWGSSISYSCVDGYQLSHSAILSCEGHGVWKGEVPQC
LXXXXXXXXTPAEGRQSGKSFTYKSEILFQCKSPFILVGSSRRVCQADGSWSGVQPICIX
XXXXXXXXXXXXXXXXXXXXXXXXVGSTVFFRCRKGYHIQGSTTRTCLANLTWSGIQTEC
IPHATRQPETPVHAVVRAIDLPTFGYTLLYTCHPGLFLTGGSEPRTCKADMKWTGKSSVC
KSKGVREVNETVTKTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGLERGGFTF
QGDVHGKDFGKFKLERQDPSSSEHESSNHHQGTSSGSVAAAILVPFFALILSGFAFYLYK
HRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTEAKAVRFDTTLNTVCTVV
Download sequence
Identical sequences ENSOPRP00000004163 ENSOPRP00000004163

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.