SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000004205 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000004205
Domain Number 1 Region: 380-434
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000114
Family Laminin-type module 0.00043
Further Details:      
 
Domain Number 2 Region: 337-382
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000193
Family Laminin-type module 0.0022
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000004205
Domain Number - Region: 6-54
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000391
Family Laminin-type module 0.017
Further Details:      
 
Domain Number - Region: 244-282
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00195
Family EGF-type module 0.07
Further Details:      
 
Domain Number - Region: 613-666
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0259
Family alpha-catenin/vinculin 0.01
Further Details:      
 
Domain Number - Region: 436-471
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0653
Family Laminin-type module 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004205   Gene: ENSOPRG00000004555   Transcript: ENSOPRT00000004568
Sequence length 975
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_241:634:15177:1 gene:ENSOPRG00000004555 transcript:ENSOPRT00000004568 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SPQCDCDSAGVVKLCEAGRCACKTAVTGERCDRCRPGHYYLEQDNPEGCTPCFCYGHSDN
CRSATQYSVHRVTSTFPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGYLDNVTISARPVPGAPA
PWVEECACPAGYRGQFCQDCASGYKRDAAGLGPFGACVPCNCQGGACDPDTGDCYAGDEN
PGIQCADCPAGFYNDPQDPRGCKPCPCGEGLGCSVVPETEEVVCSSCPLGAMGARCESCA
DGYFGDPLGEHGPVRPCQPCQCNNNVDPRASGNCDHVTGRCLKCIHNTAGAHCDQCPAGY
FGDPLAPYVEDKCRACNCNPAGSENRQCRRDGSCICKPGFSGPSCEREVQATVPTSCPAC
YQQVHSQLDLLTEQLRNLEALVSKAQGSAVPDSELEGRLQQAERALQDILQEAQVSQDAG
RALGFQLAKARSQENNFRARLAELRRTAESLLALGGPHLRQAQDTRRLLTQTRLHLEESD
ASLQNIQVPLSSEHGVGPGSFRSLAQEAMRLADSHVDSAGSMEQLARETEDLTKQVLSLT
RRTPGTGGGDGGPDGSLVPGLVGKLEHTRSLARQLSGEAAQADGAANSALQRGLHLQDSV
AQLQLQRVDVQVLEAEAKRARAAAETLSSRVTQRLDALTHVHSRLASWEEEAQQLLQTGQ
DARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
RLSSISQKVAASSARTRQVEAAMGSAAADAQRARNAAAEVQQIARGIEQDIGSLNLEANG
TADGALALEKGLATLKSDLRELEGELASKGLELDSDMDTVQAVAVEAQRVGAGAESAGAA
VQGTLSVLDSVLQLL
Download sequence
Identical sequences ENSOPRP00000004205 ENSOPRP00000004205

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]