SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSOPRP00000004358 from Ochotona princeps 76

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  ENSOPRP00000004358
Domain Number - Region: 287-334
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000199
Family Laminin-type module 0.012
Further Details:      
 
Domain Number - Region: 720-753
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00283
Family EGF-type module 0.027
Further Details:      
 
Domain Number - Region: 200-245
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0036
Family EGF-type module 0.038
Further Details:      
 
Domain Number - Region: 592-637
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0103
Family Laminin-type module 0.028
Further Details:      
 
Domain Number - Region: 371-420
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0237
Family Laminin-type module 0.05
Further Details:      
 
Domain Number - Region: 157-184
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0272
Family Laminin-type module 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004358   Gene: ENSOPRG00000004700   Transcript: ENSOPRT00000004732
Sequence length 969
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_901:125153:323166:-1 gene:ENSOPRG00000004700 transcript:ENSOPRT00000004732 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MHTPSIRSTTRDAPISSTGSSAPGTALCTEECVHGRCVSPDTCHCEPGWGGPDCSSXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCEELCPPGSHGAHCELRCPCQNGGACHHITGECACPPGWTG
AVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPLGTFGFQCS
QHCDCHNGGQCSPTTGACECEPGYKGPSCQERLCPEGLHGPGCTLPCPCDAANTISCHPV
TGACTCQPGWSGHHCNESCPAGYYGDGCQLPCTCQNGADCHSITGSCTCAPGFMGEVCMV
PCAAGTYGPNCSSICSCHNGGTCSPVDGSCTCKEGWQGPDCSLPCPSGTWGLNCNESCTC
ANGAACSPVDGSCSCTPGWLGATCELPCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPGSYG
HGCAQPCPLCVHSSGPCHHVIGVCGCFPGVSGTLCNQVCAGGRFGQDCAQLCSCANNGTC
SPIDGSCQCFPGWIGKDCSQACPPGFWGPACFHTCSCHNGASCSAEDGACHCTPGWTGLF
CTQRCPAAFFERDCGRVSQCQNGASYDISGKCPCRTGFAGQHCEQRCAPGSFGYGCQQLC
ECMNNATCDHVTGTCYCTPGFKGIRCDQAALMMEELNPYTKISPALGAERHSVGAVTGII
LLLFLIVVLLGLFAWRRWRQKEKGRDLAPRVSYTPAMRVTSTNYSLSDVCGMDRRQNTYI
MDKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRHKPAR
GPSQDKQSE
Download sequence
Identical sequences ENSOPRP00000004358 ENSOPRP00000004358

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