SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000004579 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000004579
Domain Number 1 Region: 442-499
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.76e-25
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 2 Region: 176-228
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.4e-19
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 3 Region: 136-191
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.27e-18
Family Classic zinc finger, C2H2 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004579   Gene: ENSOPRG00000004995   Transcript: ENSOPRT00000004979
Sequence length 517
Comment pep:novel genescaffold:pika:GeneScaffold_5394:211450:213840:-1 gene:ENSOPRG00000004995 transcript:ENSOPRT00000004979 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
WKSGPKTTTSTQTQDSSFQVPIMKRSKRNRPWGLKSEKYDIYEVRLEKKQDKKENVQIVS
VTNKKIPTLEKSHKNIECSRNANLKSVHTKQQMVSIEKTPPKCEIQGTTFKQNVNLPSQP
KITAEKRYKCSMCEKTFINTSSLRKHEKNHSGRELFKCCSKAFSQSSALIQHQITHTGEK
PYVCKECGKAFTLSTSLYKHLRTHTVEKSYRCKECGKAFSRRSGLFIHXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXGISFGQSSALIQHRRIHTGEKPFKCNTCGKTFRQSSSRIAH
QRIHTGEKPYECNTCGKLFNHRSSLTNHCKIHIEEDP
Download sequence
Identical sequences ENSOPRP00000004579 ENSOPRP00000004579

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]