SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000004912 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000004912
Domain Number 1 Region: 118-354,397-462,540-613
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 1.43e-111
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.00000378
Further Details:      
 
Domain Number 2 Region: 597-720
Classification Level Classification E-value
Superfamily Class II aaRS ABD-related 2.57e-31
Family Anticodon-binding domain of Class II aaRS 0.00027
Further Details:      
 
Domain Number 3 Region: 65-100
Classification Level Classification E-value
Superfamily S15/NS1 RNA-binding domain 0.00000471
Family a tRNA synthase domain 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004912   Gene: ENSOPRG00000005342   Transcript: ENSOPRT00000005351
Sequence length 744
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_30:47494:170439:1 gene:ENSOPRG00000005342 transcript:ENSOPRT00000005351 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSPRSVLGAARAVLLLSLPARPSLPPRRPLSAPARCRIAVPSAAASRSSMDGAEAEEVLA
PLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVDRPKME
DTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTVLTP
EPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLEKLMSDKKCSAEKKAEMESVLAQ
LDNYRLQELGDLFVNYNVKSPTTGNDLSAPVPFNLMFQTFIGPGGNMPGYLRPETAQGIF
LNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPNEKDHPKF
QNVADLSLCLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKVGVSPE
KLRFRQHMENEMAHYACDCWDAESKTSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFTIETE
GKTFQLTKDMVSVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTVLEHTFHVREGDEQRTFF
SFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGVSHKVDDSSGSIGRRYARTDEIG
VAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPTVVRDLANGSITWADVEARYPL
FEGQETGKRHDGMRTLLTTFYCLC
Download sequence
Identical sequences ENSOPRP00000004912 ENSOPRP00000004912

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]