SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000004941 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000004941
Domain Number 1 Region: 184-257
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 2.17e-29
Family POU-specific domain 0.0000286
Further Details:      
 
Domain Number 2 Region: 259-340
Classification Level Classification E-value
Superfamily Homeodomain-like 2.82e-19
Family Homeodomain 0.00019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004941   Gene: ENSOPRG00000005379   Transcript: ENSOPRT00000005381
Sequence length 436
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4594:52543:127414:1 gene:ENSOPRG00000005379 transcript:ENSOPRT00000005381 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVNLEPMHTDLKMSGDVADSTDTRGSLSQVEPGNDRNGLDFNRQIKTEDLSDSLQQTLPH
RPCHLSQAPAMMSGNQMSGVSTRPLHDMASLHPLQQLVLVPGHLQSVSQFLLSQTQPGQQ
GLQPNLLPFPQQQSSLLLPQTGPGLASQAVGRPGLPGSTLEPHLEASQHLPGPKHLTSSA
GPDEPSDLEELERFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFK
NMCKLKPLLEKWLNDAESSPSDPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRF
QDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCPVATPIKPPIYNSRLVSPS
GSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSPGVGLHANSPTASQNNSKAAVNSSSNF
NSSGSWYRWNHPTYLH
Download sequence
Identical sequences ENSOPRP00000004941 ENSOPRP00000004941

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]