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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000004966

Domain assignment for ENSOPRP00000004966 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000004966
Domain Number 1 Region: 2002-2161
Classification Level Classification E-value
Superfamily YWTD domain 2.35e-30
Family YWTD domain 0.0000829
Further Details:      
 
Domain Number 2 Region: 1361-1480
Classification Level Classification E-value
Superfamily YWTD domain 8.76e-22
Family YWTD domain 0.0000795
Further Details:      
 
Domain Number 3 Region: 376-483
Classification Level Classification E-value
Superfamily YWTD domain 0.00000000000000262
Family YWTD domain 0.0015
Further Details:      
 
Domain Number 4 Region: 1774-1867
Classification Level Classification E-value
Superfamily YWTD domain 0.0000000000034
Family YWTD domain 0.003
Further Details:      
 
Domain Number 5 Region: 4001-4103,4149-4177
Classification Level Classification E-value
Superfamily YWTD domain 0.00000000000497
Family YWTD domain 0.00091
Further Details:      
 
Domain Number 6 Region: 2353-2438
Classification Level Classification E-value
Superfamily YWTD domain 0.00000000000902
Family YWTD domain 0.0015
Further Details:      
 
Domain Number 7 Region: 566-633,681-767
Classification Level Classification E-value
Superfamily NHL repeat 0.0000000000759
Family NHL repeat 0.014
Further Details:      
 
Domain Number 8 Region: 3626-3663
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 9 Region: 914-958
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000183
Family LDL receptor-like module 0.00067
Further Details:      
 
Domain Number 10 Region: 2925-2966
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 11 Region: 3507-3544
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 12 Region: 3665-3701
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000262
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 13 Region: 878-917
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000445
Family LDL receptor-like module 0.0004
Further Details:      
 
Domain Number 14 Region: 1001-1039
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000055
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 15 Region: 2794-2830
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000126
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 16 Region: 2837-2871
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 17 Region: 1040-1076
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000183
Family LDL receptor-like module 0.00034
Further Details:      
 
Domain Number 18 Region: 3586-3621
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000327
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 19 Region: 2580-2621
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000563
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 20 Region: 3543-3583
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000576
Family LDL receptor-like module 0.0009
Further Details:      
 
Domain Number 21 Region: 192-232
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000599
Family EGF-type module 0.0045
Further Details:      
 
Domain Number 22 Region: 2961-3009
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000762
Family EGF-type module 0.014
Further Details:      
 
Domain Number 23 Region: 2621-2660
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000798
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 24 Region: 66-101
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 25 Region: 2753-2791
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.00098
Further Details:      
 
Domain Number 26 Region: 2674-2710
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000484
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 27 Region: 1210-1256
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000067
Family EGF-type module 0.015
Further Details:      
 
Domain Number 28 Region: 2873-2914
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000864
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 29 Region: 3707-3744
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000864
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 30 Region: 2545-2582
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000288
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 31 Region: 3003-3038
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000359
Family EGF-type module 0.0061
Further Details:      
 
Domain Number 32 Region: 1170-1205
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000484
Family LDL receptor-like module 0.0025
Further Details:      
 
Domain Number 33 Region: 3354-3385
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000733
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 34 Region: 4419-4461
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000251
Family EGF-type module 0.042
Further Details:      
 
Domain Number 35 Region: 4321-4356
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000194
Family EGF-type module 0.026
Further Details:      
 
Domain Number 36 Region: 3879-3914
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000437
Family EGF-type module 0.0064
Further Details:      
 
Domain Number 37 Region: 1611-1681
Classification Level Classification E-value
Superfamily YWTD domain 0.0000706
Family YWTD domain 0.005
Further Details:      
 
Domain Number 38 Region: 161-202
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000758
Family EGF-type module 0.031
Further Details:      
 
Domain Number 39 Region: 1144-1167
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000759
Family LDL receptor-like module 0.0019
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000004966
Domain Number - Region: 4285-4320
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000144
Family EGF-type module 0.011
Further Details:      
 
Domain Number - Region: 1259-1292
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00176
Family EGF-type module 0.015
Further Details:      
 
Domain Number - Region: 4256-4283
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00221
Family EGF-type module 0.036
Further Details:      
 
Domain Number - Region: 2499-2560
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0135
Family EGF-type module 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004966   Gene: ENSOPRG00000005286   Transcript: ENSOPRT00000005407
Sequence length 4586
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_3864:101262:1148268:-1 gene:ENSOPRG00000005286 transcript:ENSOPRT00000005407 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MTLLDSGLRAVAAAAAGAGPRVPASSLQRRLTYRAPTMSELLLAFLTLSGLLPIARVLTM
GAQRDQHLCDPGEFLCHDHVTCISQSWLCDGDPDCPDDSDESLDAXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSNCQQLNCQYKCAVARNSTRCYCEAG
FEVKDDGRGCKDQDECAVYGTCSQTCINTYGSYVCSCVEGYIIQPDNRSCKAKHEPTERP
PMLLIANSETIEIFYLNGSKLATLSSVNGNEIHALNFIYNEDMICWIESRESSYQLKCIQ
ITKTGKLTDEWTIHILQSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXKLFFTDYGNIAKVERCDMDGMNRTRIIDSKQEQPAAMALDSGNKL
VYWVDLYLDYVGVVDQGKNRHTVIQGRQVRHLCGITVFEDYLYAITSDNFNIIKINRFNG
TDNHSLIKIESARGIRIYQKRTQPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXPKNELFLFYGKGRPGIVRGMDLNTKIAEEYMIPIENLVNPRALDFH
ADTNYIYFADTTSFLIGRQKIDGTERETILKDXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWMYWTDWEEDEIDDSVGRIEKAWMDGF
NRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGEILPPICKAGEFRCKNRHCIQARWKC
DGDDDCLDGSDEDPANCFNHSCPDDQFKCHNNRCIPKRWLCDGANDCGSNEDESNETCSX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTCEPLTQFICKNGRCISSK
WHCDSDDDCGDGSDEVGCVHSCLENQFRCSTGRCIPGHWACDGDNDCGDFSDENQSNCTQ
QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXRCINKAWVCDGDIDCEDQSDEEDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCP
DGSDEGSLCDECSLSNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCTYHLKC
SQVCEQHKHTVKCSCYEGWKLDVDGESCTSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAIEVVVEHGLATPEGLTVDW
IAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWTDWDANFPRI
ESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDAXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKKFLLYARRSEI
RGVDIDNPYFNFITAFTVPDIDDVTVIDFDAYEERLYWTDVKTQTIKRAFINGTGLQTVI
SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSIDYVENKLYWISSGNGTINRCNLDG
GNLEVIESMKEELTKATALTIMDKKLWWADQNLGQLGTCSKRDGRNLTILRNKTSGVVHM
KVYDKEAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIESFLMYS
VHEGIRGIPLEPSDKMDALMPISGTSFAVGIDFHAXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXNIYWTDHGFNLIEVARLNGSFRYVIISQGLDQPRSIAVH
PEKGFLFWTEWGQMPCIGKARLDGSEKVILVSMGIAWPNGISIDYEENKLYWCDARTDKI
ERIDLETGGNREVVLSGSNVDMFSVAVFGAYIYWSDRAHANGSIRRGHKNDATEIVTMRT
GLGVNLKEVKVFNRVREKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXHPHVLALDECQNLMFWTNWNEQYPSIMRSTLSGKNAQVVISTDILTP
NGLTIDHRTEKLYFSDGSLGKIERCEYDGSQRHXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSPCALLNGGCHDLCLLTPDG
RVNCSCRGDRILLDDNRCVIKNSSCNVYSEFECGNGECIDYQLTCDGAPHCKDKSDEKLL
YCENRSCRRGFKPCYNRKCISHSKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIP
RSARCNQNIDCADASDEKNCNNTDCTHFYKLGVKTSGFIKCNSTSLCILPTWICDGSNDC
GDYSDELKCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCSWNQF
ACSAHKCISKHWICDGENDCEDGLDENDNICGAITCAADMFNCQGSHACVPRQWLCDGER
DCPNGSDELSTAGCAPNNTCNENTFMCRNKVCIPKQFVCDHDDDCGDGSDESLQCGYRQC
SAEEFSCADGRCLLNSQWQCDGDFDCPDHSDEAPLNPKCNSAEQSCNSSFFMCKNGRCIP
SGALCDNKDDCGDGSDERNCHVNECLSKKISGCSQDCQDLPVSYKCKCWPGFQLKDDGRT
CVDIDECSTGFPCSQQCINTYGTYKCLCTDGYAAQPDNPNGCKSLAXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXGLNNVIAIDFDYREEFVYWIDSSRPNGSRINRMYLNGSDVKXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRCK
TDKCIPFWWKCDTVDDCGDGSDEPDDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXPVNLRCNGQDDCDEEDERDCPENSCSPDYFQCKXX
XXXXXXXXXXXXXXXXXXXXXXXXXXKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSD
EENCKPQTCTLKDFLCANGDCVSSRFWCDGDFDCADGSDERNCETSCSKDQFQCSNGQCI
SAQWKCDRHEDCKYGEDEKNCEPASPTCSSSEYICASGRCISASLKCNGEYDCADGSDEM
DCVTECHEDQFRCKNKAHCIPIRWLCDGIHDCVDGSDEENCDRGGNICRTDEFLCNNSLC
KLHFWVCDGQDDCGDNSDEDPDMCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNECLVFGTCSHLCINTEGSYK
CVCDHNFQEKNNTCIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPEFKRPRDIAVDWVAGNIYWT
DHSRMHWFSYYTTHWTSLRYSINVGQVNGPNCTRLLTNMAGEPYAIAVNPKRGMMYWTVI
GDHSHIEEAAMDGTLRRILVQKNLQRPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXLLHPHRIDIFEDYIYGAGPKSGVFRVQKFGHGSVEFLALDVDKTKGVLISHR
YKQLDLPNPCLDLACEFLCLLNPSGATCVCPEGKHWSNGTCRDANLLDDSCKLGENGGRC
ILNEEGDLRCHCWPSYSGERCEVNHCSNYCQNGGTCTPSTLGRPTCTCALGYTGPSCGKT
VCEAFCQNGGTCVVTAGNQPHCHCLPEYTGDRCQYYVCHXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTNGKIASSCQLCDGYCYNGGTCQLD
PETSVPVCLCSTNWSGTQCERPAPKSSKSDHISTRSIAIIVPLVLLVTLITTLVIGLVLC
RRKRRTKTIRRQPIINGGINVEIGNPSYNMYEVDHDHNDGGLLDRGFMIDTTKARYRGGG
PSAFKLPHTAPPIYLNSDLKGPLTAG
Download sequence
Identical sequences ENSOPRP00000004966 ENSOPRP00000004966

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.