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Domain assignment for ENSOPRP00000005122 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000005122
Domain Number 1 Region: 80-113
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000851
Family LDL receptor-like module 0.004
Further Details:      
 
Domain Number 2 Region: 163-204
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000131
Family LDL receptor-like module 0.0038
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000005122
Domain Number - Region: 127-156
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000115
Family LDL receptor-like module 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000005122   Gene: ENSOPRG00000005588   Transcript: ENSOPRT00000005580
Sequence length 206
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_245:240674:249934:-1 gene:ENSOPRG00000005588 transcript:ENSOPRT00000005580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNKVFPQGDVTSTTTAGPKALAGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAQACVTPTNRTGFLCHDRRSCIPASGVCDGIRTCAHGEDEDESLCRDLPRS
LPGFLVTRCGDPASWIYSDQKCDGTNNCGDCSDELSPASACPPCGPGWWRCQPTVFRYCS
CIPRSLCQDHVQHCSDWSDEYSCPGP
Download sequence
Identical sequences ENSOPRP00000005122 ENSOPRP00000005122

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