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Domain assignment for ENSOPRP00000005908 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000005908
Domain Number 1 Region: 529-574
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000432
Family TSP-1 type 1 repeat 0.00091
Further Details:      
 
Domain Number 2 Region: 36-83
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000109
Family TSP-1 type 1 repeat 0.0034
Further Details:      
 
Domain Number 3 Region: 103-129
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000617
Family LDL receptor-like module 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000005908   Gene: ENSOPRG00000006438   Transcript: ENSOPRT00000006445
Sequence length 574
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_3212:144496:245130:1 gene:ENSOPRG00000006438 transcript:ENSOPRT00000006445 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MCAAFFTLSLVTCQLGVTAQEKANQRVSRASAPTAVDCQLSNWSEWTDCFPCQDTKYRHR
SLLQPNKFGGTICSGDIWDQASCSSPTACLRPAECGXXXXXXXXXRCLKRHLVCNGENDC
LDGSDEDNCEDSGAVENDCSQYEPIPGSEKAALGXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALADTKISSELYEDGNELLVTVK
NGRSLFAGVTIANVSKDLGVSGSETAFFLNKLSKYNEKKYRFMRIFTKVQTAQFKMRRDD
IMLDEGMLQSLMELPEQYNYGMYSKFINDYGTHYITSGSMGGTYEYILVLDKEKMESLGI
TTEDINKCFGGMVGLHFIISGGSLQVKDCKRSGSGNQEIENINLAVEDIISRVRGGSSDW
GGGLAQNSSTVTYRFWGRSLKYNPVVIDFEMQPIHEVLQHTNLGRMEAKRQNLRRALDQY
LMEFNACRCGPCFNNGEPILEGTSCRCQCSNGRKGSACEQMEQKGVKADGRWSCWSAWSV
CTAGTRERRRECNNPAPQNGGASCPGWRVQTQAC
Download sequence
Identical sequences ENSOPRP00000005908 ENSOPRP00000005908

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