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Domain assignment for ENSOPRP00000006741 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000006741
Domain Number 1 Region: 44-133
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.02e-33
Family SCAN domain 0.000079
Further Details:      
 
Domain Number 2 Region: 386-430
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000627
Family Classic zinc finger, C2H2 0.031
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000006741
Domain Number - Region: 223-260
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0248
Family KRAB domain (Kruppel-associated box) 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000006741   Gene: ENSOPRG00000007353   Transcript: ENSOPRT00000007358
Sequence length 481
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_5366:55410:60304:-1 gene:ENSOPRG00000007353 transcript:ENSOPRT00000007358 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLPLERAFASPRNSPSRPELPTVGSAARVRREGPMNIPERTAADLEFSRLRFREFVYQEA
AGPHQTLARLHELCRQWLRPEACSKEQILELLVLEQFLGILPDRVRPWVVAQYPESCRKA
ASLVEGLADVLEEPGMPLYSPARASSPLNEGVYERLLLPGGPASPNGDPGSVEVLASPET
PWPAVHPVLLEQGSSREERAEVASAARAERKPKAFPEEPLHMGEWGHLDPSEENLKSYRK
LLLWGYQLSQPDATSGLETEEPPLLEGELPGGSLSGHRRPWGSKGVQRLGGDLPVDPSSG
TTQEEEEQPGKFLPLDGELSPVTGAQRQSVIRKPAQDWGAAMPETKRSHPEEGDEEGPEC
VSGAGRSAGFVASQDPGADEPGACRGKPYTCSECKEAFAWISLLTEHYKSHKSRKCYTCQ
GCCRTYHFSWNPAEYQKTPEEEAQAQGPRPAICEAHAGGRLHRFPECVEDDLLPVEPEVT
W
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Identical sequences ENSOPRP00000006741 ENSOPRP00000006741

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