SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000006890 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000006890
Domain Number 1 Region: 863-1043
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.1e-37
Family Laminin G-like module 0.0023
Further Details:      
 
Domain Number 2 Region: 452-657
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.68e-36
Family Laminin G-like module 0.0015
Further Details:      
 
Domain Number 3 Region: 669-855
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.36e-35
Family Laminin G-like module 0.0092
Further Details:      
 
Domain Number 4 Region: 266-435
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.96e-34
Family Laminin G-like module 0.0024
Further Details:      
 
Domain Number 5 Region: 4-176
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.58e-31
Family Laminin G-like module 0.0027
Further Details:      
 
Domain Number 6 Region: 1076-1181
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000000000000169
Family Laminin G-like module 0.0000288
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000006890
Domain Number - Region: 211-242
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00128
Family EGF-type module 0.02
Further Details:      
 
Domain Number - Region: 1225-1279
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.00805
Family Laminin G-like module 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000006890   Gene: ENSOPRG00000007523   Transcript: ENSOPRT00000007525
Sequence length 1461
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4426:16587:966187:-1 gene:ENSOPRG00000007523 transcript:ENSOPRT00000007525 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEG
FCDFLELILTRGGRLQLSFSIFCAEPATLLTDTPVNDGAWHSVRIRRQFRNTTLFIDQVE
AKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQV
APLDSGEVRLDDEPPSSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKD
CSQVGFASGLAHLMMGDQXXXXXKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTL
QQNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRN
LRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFM
GCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPK
WNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDARHPQMIKVDFFAIEMLDGHLYLLLD
MGSGYIKIKALQKKVNDGEWYHVDFREDGRSGTISVNTLRTPYTAPGESEILDLDDELYL
GGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRE
TAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVM
HTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGP
ETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDAQAMTGQMAGDHTRLEFHNIETGIITER
RYLSSVPSNFIGHLQLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYV
ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIK
GSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETY
KSLPKLVHAKEGFQGCLASVDLNGRLPDLISDAILCNGQIERGCEGPSTTCQEDSCSNQG
VCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGF
STVQKEAVLVRVDSSSGLGDYLELHIHQVKIGVKFNVGTDXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLK
VLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTARRG
KPPTKEPVSQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRAGGREPYPGSAEVIRE
SSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEK
QPSSAKSANKNKKNKDKEYYV
Download sequence
Identical sequences ENSOPRP00000006890 ENSOPRP00000006890

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]