SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000007901 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000007901
Domain Number 1 Region: 158-235
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 4.53e-23
Family Intermediate filament protein, coiled coil region 0.0000862
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000007901   Gene: ENSOPRG00000008629   Transcript: ENSOPRT00000008632
Sequence length 826
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4670:90435:97781:1 gene:ENSOPRG00000008629 transcript:ENSOPRT00000008632 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EHLLEDIAHVRQRLDDEARQREEAEAAARALCRFAQEAEAARVELQKKAQALQEECGYLR
RHHQEEVGELLGQIQSCGAAQTQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSEEWF
RVRLDRLSEAAKVNNDAMRSAQEEITEYRRQLQARTTELEALKGTKDSLERQRSELEDRH
QADLASYQEAIQQLDNELRNTKWEMGAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRI
GFGPSPFSLPEGLPKIPPTSTHIKVKSEEKVKVVEMSEETVIVEEQTEETQVTEEVTEEE
EKEAKEEEGEEEGGEEEEEGEEEEAKSPTAEGAASPEKEAKSPVKEETKSPAEAKSPEKE
EAKSPAEVKSPEKAKSPVKEEVKSPEKVKSPLKEEAKSPAEVKSPEKAKSPVKEEAKSPA
EVKSPEKVKSPVKEEAKSPAEAKSPVKEEAKSPEKAKSPLKEEAKSPAEAKSPEKAKSPV
KEEAKSPEKAKSPLKAEAKSPEKAKSPVKEEAKSPEKVKSPVKEEVKSPEKAKSPVKEEV
KSPEKVKSPVKEEVKSPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPGKDEARS
PADIKSPGKSRSPIKEEAKSPGKETPKKEEVKSPVKEEVKAKEPPKKREEEKTPAPLKTE
EKAAKKEEAPKEAPKPAVEETKEAAVEKPKESKAEAKKEEVREEKKATTPEKEAPSKVQA
KEEAKPKEKTEVAKKEPEDAKAKEPSKPTKKEEVLAVPEKKDAKGEAQKTEEKPKAEAKA
KEDDKALSKEPSKPKTEKAEKSSSTDQKDSRPPEKAVEDKAAKGEK
Download sequence
Identical sequences ENSOPRP00000007901 ENSOPRP00000007901

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]