SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000008416 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000008416
Domain Number 1 Region: 181-211
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000265
Family EGF-type module 0.028
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000008416
Domain Number - Region: 328-368
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00057
Family EGF-type module 0.023
Further Details:      
 
Domain Number - Region: 294-331
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0328
Family EGF-type module 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000008416   Gene: ENSOPRG00000009200   Transcript: ENSOPRT00000009197
Sequence length 531
Comment pep:novel genescaffold:pika:GeneScaffold_4790:4553:112170:-1 gene:ENSOPRG00000009200 transcript:ENSOPRT00000009197 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTNKSMLVLNLLVLYISSVNGEATCKPQLVQEWHPQPASYIINWTLRENICVDFYEDCWG
LDMNTKTNMLDNKVVPQICPLQIQSGDILVISTEPSLLELNLMNVSEASFINCQQNITNE
DQLLFGCKLKGMYTVNSRWLDIGTHYFISVVTSGPSLCQMGLRLNVTVKQQFCQESLDLE
FCSGHGKCLSEIWSKSYSCHCQPPYSGKYCEKLDACCCKPCKINENCNDTRGTLTKQGCE
CMFHLTFTGRNRSEIIGQCQPHICFHGNCTNITEMSFICEYDEQISGPYSAESIKHCDYL
SCLKGEICQNGTSVYFFEYPEGFLNQNCEPDVVECSSVTCWTDINCLNITSDLTCICSPM
LTGSSCKLIQMSHKIFTGKNNFNWTTSEEACHYRCMPGITGKNDDKEIDPCRLVSINCVN
EEWNFHMNGQFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXREVDKCGITIVAYLSLTKSRTEEGIDVTPENNKSSECFPYKGTIQ
Download sequence
Identical sequences ENSOPRP00000008416 ENSOPRP00000008416

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]