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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000008594

Domain assignment for ENSOPRP00000008594 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000008594
Domain Number 1 Region: 423-679
Classification Level Classification E-value
Superfamily YWTD domain 6.54e-61
Family YWTD domain 0.000000943
Further Details:      
 
Domain Number 2 Region: 725-981
Classification Level Classification E-value
Superfamily YWTD domain 4.84e-56
Family YWTD domain 0.00000162
Further Details:      
 
Domain Number 3 Region: 1337-1593
Classification Level Classification E-value
Superfamily YWTD domain 8.11e-56
Family YWTD domain 0.0000032
Further Details:      
 
Domain Number 4 Region: 1032-1285
Classification Level Classification E-value
Superfamily YWTD domain 1.7e-47
Family YWTD domain 0.00000306
Further Details:      
 
Domain Number 5 Region: 343-415,671-719
Classification Level Classification E-value
Superfamily Growth factor receptor domain 5.65e-16
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 6 Region: 246-286
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000113
Family LDL receptor-like module 0.00064
Further Details:      
 
Domain Number 7 Region: 129-167
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00068
Further Details:      
 
Domain Number 8 Region: 210-248
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00082
Further Details:      
 
Domain Number 9 Region: 48-87
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 10 Region: 291-327
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000641
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 11 Region: 1291-1336
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000112
Family EGF-type module 0.0066
Further Details:      
 
Domain Number 12 Region: 86-124
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000484
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 13 Region: 987-1040
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000574
Family EGF-type module 0.012
Further Details:      
 
Domain Number 14 Region: 8-49
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000223
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 15 Region: 1593-1632
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000718
Family EGF-type module 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000008594   Gene: ENSOPRG00000009347   Transcript: ENSOPRT00000009390
Sequence length 1883
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4227:479899:520292:-1 gene:ENSOPRG00000009347 transcript:ENSOPRT00000009390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LASSSECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHC
DNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFPCQNGYCIRSLWHCDGDNDCGDN
SDEQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEENCPSVGARPPPRXXXXXX
XXXXXXXXXXXXXXXXXXXXXSDESDCSSHQPCRSGEFMCDSGLCINAGWRCDGDADCDD
QSDERNCTTAMCSAEQFRCHSGRCVRLSWRCDGEVDCADNSDEENCENTGSPQCASDQFL
CWNGRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVHNGGCAQKCQMVRGTVQC
TCHTGYRLMEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP
EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLN
GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRA
IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK
HHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR
NKLHFPMDIHTLHPQRQPAGKNRCGENNGGCTHLCLPSGQNYTCACPTGFRKISSHACAQ
SLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTIS
RAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENL
DRPRDIVVEPTGGYMYWTDWGASPKIERAGMDASGRQVIISTNLTWPNGLAIDYESQRLY
WADAGMKTIEYSGLDGSKRKVLIGSQLPHPFGLTLYGERIYWTDWETKSIQSADRRTGLD
RETLQENLENLMDIHVFHRRRPPVSTPCAVENGGCSHLCLRSPNPSGFSCTCPTGINLLP
DGKTCSPGMNSFLIFARRIDIRMVSLDIPYFADVVVPINVTMKNTIAIGVDPQEGKVYWS
DSTLHRISRASLDGSQHEDIITTGLQTTDGLAVDAIGQKVYWTDTGTNRIEVGNLDGSMR
KVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTV
DKASSQLLWADAHTERIEAADLNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRA
DKGTGSNAILVRSNLPGLMDIQAVDRAQALGFNKCGSRNGGCSHLCLPRPAGFSCACPTG
ILLKGDGKSCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGK
VYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLD
GSCRKVLINSLDEPRAIAVFPRKGFLFWTDWGHIAKIERAHLDGSERKVLINTDLGWPNG
LTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSI
QRVDKYSGRNKETVLANVEGLMDIIVVSPQRQMGTNACGVNNGGCTHLCFARASDFVCAC
PDEPDGRPCSLVPDLVPPAPRASEKSPVLPNTIPPTLRAATSRTHTSLEEAEGRCSERDA
QQGLCAHSNEAVPAVPGEGLHVSYAIGGLLSVLLILVVIAALMLYRHKKSKFTDPAMGNL
TYSNPSYRTSTQEVKIEAIPKPAMYNQLCYKKEGGPDHSYTKEKIKIVEGICLLAGDDAE
WDDLKQLRSSRGGLLRDHVCMKTDTVSIQASSGSLDDTETEQLLQGEQSECSSVHTAATP
ERRGSLPDTGWKHERKLSSESQV
Download sequence
Identical sequences ENSOPRP00000008594 ENSOPRP00000008594

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.