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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000009538

Domain assignment for ENSOPRP00000009538 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000009538
Domain Number 1 Region: 759-1010
Classification Level Classification E-value
Superfamily YWTD domain 6.54e-45
Family YWTD domain 0.00000617
Further Details:      
 
Domain Number 2 Region: 1557-1720
Classification Level Classification E-value
Superfamily Fibronectin type III 2.16e-23
Family Fibronectin type III 0.0027
Further Details:      
 
Domain Number 3 Region: 1932-2105
Classification Level Classification E-value
Superfamily Fibronectin type III 1.53e-16
Family Fibronectin type III 0.0052
Further Details:      
 
Domain Number 4 Region: 350-601
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 0.0000000000016
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.014
Further Details:      
 
Domain Number 5 Region: 1414-1452
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000602
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 6 Region: 1321-1357
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000196
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 7 Region: 1151-1192
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000275
Family LDL receptor-like module 0.00067
Further Details:      
 
Domain Number 8 Region: 1194-1231
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000654
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 9 Region: 1075-1112
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 10 Region: 1236-1269
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000432
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 11 Region: 1368-1401
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000445
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 12 Region: 1468-1505
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000105
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 13 Region: 1747-1833
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000131
Family Fibronectin type III 0.0051
Further Details:      
 
Domain Number 14 Region: 1508-1547
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000236
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 15 Region: 1119-1152
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000236
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 16 Region: 1273-1308
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000262
Family LDL receptor-like module 0.0023
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000009538
Domain Number - Region: 1839-1923
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0673
Family Fibronectin type III 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000009538   Gene: ENSOPRG00000010407   Transcript: ENSOPRT00000010439
Sequence length 2212
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2350:57994:226831:1 gene:ENSOPRG00000010407 transcript:ENSOPRT00000010439 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MATRSSRRESRLPFLFTLVLLLAPGALCEVWTQTLHGGRAPLPQDRGFRVVQGPRELRLW
ERGDARGASRADEKPLRRRRSAALQPEPIKVYGQVSLNDSHNQMVVHWAGEKSNVIVALA
RDSLALARPRSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIFAD
AYIQYLWITFDFCNTIHGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQXXXXXXXXXXX
XXXXXXXXXXXXGIDPYDKPNTIYVERHEPSGYSTVFRSTDFFQSLENQEVILEEVRDFQ
LRDKYMFATKVVHLLDSPQQSSVQLWVSFGRKPMRAAQFITRHPINEYYIADASEDQVFV
CVSHSNNRTNLYISEAEGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGLQ
GVYIATLINGSMNEENMRSVITFDKGGTWEFLQAPAFTGYGEKIDCEXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGKNLASKTNVYVSSSAGARWREXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXYSTNEGETWKAFTFSEKPVFVYGLLTEPGEKSTVFTIFG
SNKENVHSWLILQVNATDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXDFGFRMSEDLSLEVCVPDPGFSGQSFSPPVPCPVGST
YRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAMRKSIHRYDLASGTMEQ
LPLTGLRAAVALDFDYEHNCLYWSDLALDIIQRLCLNGSTGQEVIISSDLETVEALAFEP
LSQLLYWVDAGLKKIEVANPDGDFRLTVVNSTMLDRPRALVLVPQEGIMFWTDWGDLKPG
IYRSNMDGSAAYRLVSEDVKWPNGISVDDQWIYWTDAYLDCIERITFSGQQRSVILDKLP
HPYAIAVFKNEIYWDDWSQLSIFRASKYTGSQMEILASQLTGLMDMKIFYKGKNTGSNAC
VPRPCSLLCLPKANNSKSCRCPDGVASTVLPSGVLMCDCPRGYELKNNTCVKEEDTCLRN
QYRCSNGNCINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSYKCDLE
DDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDETNCTAISHTCEA
SNFQCRNGHCIPQRWACDGDADCQDGSDEDPNCEKKCNGFRCPNGTCIPTTKHCDGLHDC
SDGSDEQHCEPLCTRFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDPAFAGCSHDPEFH
KVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEASCENPTEAPNCSRYFQFHCDNGHCI
PNRWKCDRENDCGDWSDERDCGDSHVLPSPTPAPSTCLPNYYRCSGGACVIDTWVCDGYR
DCADGSDEEACPSFANATATSAPSQLGRCNRFEFECQQPKKCIPNWRRCDGHQDCQDGQD
EANCPTHSTLTCMSWEFKCEDGEACIVLSERCDSFLDCSDESDEKSCSDELTVYKVQNLQ
WTADFSGNVTLTWMRPKKMPSAACVYNVYYRVVGESMWKTLETHSNKTNTVLKVLKPDTT
YQVKVQVQCLSKVHNTNDFVTLRTPEGLPDAPQNLQLSLHSEEEGVIMAHWTPPLHTHGL
IREYIVECSRSGSKMWTSQRAASNSTEIKNLEVNALYTIRXXXXXXXXXXXXXXXXXXXX
XXXXXIPPPNIHIDSYDENSLSFTLTVDGNIKVNGYVVNLFWAFDAHKQEKKTMNFQGSI
LSHKVGNLTAQTSYEISAWAKTDLGDSPLSFEHVTTRGVRPPAPSLKAKAVNQTAVECTW
TGPRNVVYGIFYATSFLDLYRNPTSLTTPMHNATVIVGKDEQYLFLVRVVRPYQGPSSDY
VVVKMIPDSRLPPRHLHAVHTDKTSAVIKWESPYDSPDQDLLYAITIKDLIRKVDRSYKV
KSHNSTVEYTLSKLEPGGKYNIIVQLGNMSKDTSIKITTVPLSAPDALKIITENDHVLLF
WKSLALKEKHFNESRGYEIHMLDSAMNVTAYLGNTTDNFFKISNLKLGHNYTFTVQARCL
FGSQICGEPAILLYDELGSGGDASAMQTAKSTDVAAVVVPILFLILLSLGVGFAILYTKH
RRLQSSFTAFANSHYSSRLGSAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA
Download sequence
Identical sequences ENSOPRP00000009538 ENSOPRP00000009538

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.