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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000012409

Domain assignment for ENSOPRP00000012409 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000012409
Domain Number 1 Region: 3027-3285
Classification Level Classification E-value
Superfamily YWTD domain 1.05e-56
Family YWTD domain 0.00000154
Further Details:      
 
Domain Number 2 Region: 1268-1533
Classification Level Classification E-value
Superfamily YWTD domain 2.88e-51
Family YWTD domain 0.00000212
Further Details:      
 
Domain Number 3 Region: 535-769
Classification Level Classification E-value
Superfamily YWTD domain 6.02e-40
Family YWTD domain 0.0000101
Further Details:      
 
Domain Number 4 Region: 1977-2151
Classification Level Classification E-value
Superfamily YWTD domain 6.41e-29
Family YWTD domain 0.0000529
Further Details:      
 
Domain Number 5 Region: 1689-1840
Classification Level Classification E-value
Superfamily YWTD domain 4.71e-25
Family YWTD domain 0.00045
Further Details:      
 
Domain Number 6 Region: 3895-3994,4040-4141
Classification Level Classification E-value
Superfamily YWTD domain 2.62e-24
Family YWTD domain 0.00016
Further Details:      
 
Domain Number 7 Region: 311-468
Classification Level Classification E-value
Superfamily YWTD domain 7.59e-22
Family YWTD domain 0.00036
Further Details:      
 
Domain Number 8 Region: 2344-2468
Classification Level Classification E-value
Superfamily YWTD domain 0.0000000000000235
Family YWTD domain 0.00017
Further Details:      
 
Domain Number 9 Region: 3567-3607
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000122
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 10 Region: 928-968
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000131
Family LDL receptor-like module 0.00079
Further Details:      
 
Domain Number 11 Region: 847-887
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000144
Family LDL receptor-like module 0.00011
Further Details:      
 
Domain Number 12 Region: 24-63
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000157
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 13 Region: 3610-3646
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000275
Family LDL receptor-like module 0.00046
Further Details:      
 
Domain Number 14 Region: 2691-2728
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000034
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 15 Region: 3651-3696
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000393
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 16 Region: 3367-3407
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000419
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 17 Region: 888-930
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000432
Family LDL receptor-like module 0.00056
Further Details:      
 
Domain Number 18 Region: 1013-1051
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000432
Family LDL receptor-like module 0.000088
Further Details:      
 
Domain Number 19 Region: 3485-3526
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000602
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 20 Region: 973-1011
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000641
Family LDL receptor-like module 0.00087
Further Details:      
 
Domain Number 21 Region: 3529-3568
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000124
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 22 Region: 1056-1096
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.00012
Further Details:      
 
Domain Number 23 Region: 2813-2849
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 24 Region: 3449-3484
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000497
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 25 Region: 2731-2765
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000055
Family LDL receptor-like module 0.00098
Further Details:      
 
Domain Number 26 Region: 2598-2637
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000812
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 27 Region: 2851-2890
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000956
Family LDL receptor-like module 0.00055
Further Details:      
 
Domain Number 28 Region: 3409-3447
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000109
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 29 Region: 2561-2598
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000128
Family LDL receptor-like module 0.0025
Further Details:      
 
Domain Number 30 Region: 142-189
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000013
Family EGF-type module 0.004
Further Details:      
 
Domain Number 31 Region: 2903-2938
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000017
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 32 Region: 2771-2805
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000183
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 33 Region: 2980-3021
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000164
Family EGF-type module 0.0054
Further Details:      
 
Domain Number 34 Region: 71-106
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000236
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 35 Region: 2948-2986
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000318
Family EGF-type module 0.021
Further Details:      
 
Domain Number 36 Region: 1105-1139
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000038
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 37 Region: 1142-1177
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000393
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 38 Region: 801-846
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000445
Family EGF-type module 0.039
Further Details:      
 
Domain Number 39 Region: 3739-3774
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000511
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 40 Region: 2657-2687
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000628
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 41 Region: 3334-3365
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000733
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 42 Region: 1182-1227
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000156
Family EGF-type module 0.02
Further Details:      
 
Domain Number 43 Region: 3783-3829
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000547
Family EGF-type module 0.034
Further Details:      
 
Domain Number 44 Region: 2154-2201
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000718
Family EGF-type module 0.012
Further Details:      
 
Domain Number 45 Region: 1181-1260,1841-1887
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000091
Family Growth factor receptor domain 0.016
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000012409
Domain Number - Region: 3822-3858
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000168
Family EGF-type module 0.0091
Further Details:      
 
Domain Number - Region: 485-521
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000762
Family EGF-type module 0.016
Further Details:      
 
Domain Number - Region: 4260-4301
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00285
Family EGF-type module 0.019
Further Details:      
 
Domain Number - Region: 4366-4406
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00628
Family EGF-type module 0.048
Further Details:      
 
Domain Number - Region: 118-153
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00726
Family EGF-type module 0.035
Further Details:      
 
Domain Number - Region: 2477-2516
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0232
Family EGF-type module 0.042
Further Details:      
 
Domain Number - Region: 4149-4182
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0439
Family EGF-type module 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000012409   Gene: ENSOPRG00000013447   Transcript: ENSOPRT00000013599
Sequence length 4536
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_3770:171031:254357:1 gene:ENSOPRG00000013447 transcript:ENSOPRT00000013599 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MLTPSLLLLLSLLSAPVAAAIEAPKTCSPKQFACRDQVTCISKGWRCDGERDCPDGSDEA
PEICPQSKAQRCQPNEHNCLGTEVCVPMSRLCNGIQDCVDGSDEGPHCRELRGNCSRLGC
QHNCVPTLSGPTCYCNSSFQLQADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYL
LQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGAQVSTITPTSTRQTTAMDFSYANE
TVCWVHVGDSAAQTQLKCARMPGLKGFVDEHTINISLSLHXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXNGDTCVTLLDLALYNPKIALDPAMGKVFFTDYGQIPKVERCDMDGHNRTKL
VDTKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQGILIEHLYGLTVFEN
YLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALHIYHQRRQPRVRSHACEND
QYGKPGGCSDICLLANSHKARTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGM
DMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGI
HNVEGVAVDWMGDNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGW
MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD
RIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVGSVPPTVVL
LRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDGVT
CLANPSYVPPPQCQPGEFACANSRCVQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFK
CENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDC
GDRSDESDSCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSHSCSSTQFK
CNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWR
CDGDTDCMDSSDEKSCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDNDCEDNSDEENCE
SLACRPPSHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCDQCSLNNGGCSHNCSVAPG
EGIVCSCPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESC
RSLDPFKPFIIFSNRHEIRRIDLHKGDYSVLVPGLRNTIALDFHLSQSALYWTDVVEDKI
YRGKLLDNGALTSFEVVIQYGLVTPEGWAVDWIAGNIYWVESNLDQIEVAKLDGTLRTTL
LAGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWPNGLTV
DYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTL
AKANKWTGDNVTVVQRTNTQPFDLQVYHPSRQPMAHNLCEANGARGACSHLCLINXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXRLDGSFKNAVVQGLEQPHGLVVHPLRGKLYWTDGDNISMANMDGSNRTLLFSGQ
KGPVGLAIDFPENKLYWISSGNHTINRCNLDGSDLEVIDTMRSQLGKATALAIMGDKLWW
ADQVSEKMGTCNKADGSGSVVLRNSTTLVMHMKVYDESIQLDHEGTNPCSINNGDCSQLC
LPTSETTRSCMCTAGYSLRSGQQACEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIYW
TDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGT
ERVVLVNASISWPNGISVDYQDGKLYWCDARTDKIERIDLETGDNREVVLSSNNMDMFSV
SVFQEFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVFNRDRQKGTNVCAV
ANGGCQQLCLYRGRGQRACACAHGMLAEDGASCREYAGYLLYSERTILKSIHLSDERNLN
APVQPFEDPEHMKNVIALAFDYRAGTSPGTPNRIFFSDIHFGNIQQINDDGSGRTTIVEX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXLMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKI
ERCEYDGSHRYVILKSEPVHPALAVYGEHIFWTDCVRRAAHRATKYVGSDMKLLRVDIPQ
QPMGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRLLQEDLTCRXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRCKKTFRQCSNRRCVSNM
LWCNGADDCGDGSDEIPCNKTACGTGEFRCRDGTCIGNSSRCNQFVDCEDASDEMNCSAT
DCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERNCPGVKRPRCPLNYFA
CPSGRCIPMSWTCDKEDDCEHGEDEAHCNKFCSEAQFECQNHRCISKQWLCDGSDDCGDN
SDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESVTAGCLYNSTCDERQ
FMCQNRQCIPKHFVCDHDRDCTDGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGEN
DCHDQSDEAPKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVN
ECLSHKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGS
YKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRRLNLDGSNYTLLKQGLNNAVAL
DFDYREQMIYWTDVTTQGSMIRRMHLNGSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKG
RDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSLIGRIGMDGSDRSV
IVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDIPHIFALTLFED
YVYWTDWETKSINRAHKTTGANKTLLISTLHRPMDLHVFHALRQPDXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVCKNDKCIPFWWKCDTEDDCGDH
SDEPSDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTN
TNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDG
SDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFR
CKNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKCDGDHDCAD
GSDEKDCTPRCDMDQFQCKNGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCN
NTLCKPLAWKCDGEDDCGDNSDENPEECSRFVCPPNRPFRCKNDRVCLLIGRQCDGTDNC
XXXXXXXXXXPPTAQSTHCKDKKEFLCINQHCLSSSLRCNMFDDCGDGSDEEDCSMDPKL
TSCATNASICGDEARCVRTEKAAYCACRPGFHTVPGQPGCQDINECLRFGTCSQLCNNTK
GGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEIRSLFPGHPHSAYEQAFQGDESVRI
DAMDVHVKAGRVYWTNWHTGTISFRSLPPAAPPTTSNRHRRQIDRGVTHLNISGLKMPRG
IAIDWVAGNVYWTDSRDVIEAQMKGENRKTLISGMIDXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXDGTLGEAVAQDHIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIVAAD
SKRGLSHPFSIDVFEDYIYGVTYINNRVFRIHKFGHSPLINLTGGLSHASDVVLYHQHKQ
PEVTNPCDRKKCEWLCLLSPSGPVCTCPNGKRLDNGTCVPIPSPTPPPDAPRPGTCNLQF
NGGSCFLNARRQPKCRCQPRTVDKCELDQCWKHCRNGGICAASPSMHTLKCCTVFTYPKC
TQKVYAVYCANNSTCTDNEGNQHRCRCLPGFMGDHCQYXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXRCLEGAAFNKQSGDVICNCTDGRVVPSCLTCAGHCSNGGSCT
MNSKMMPECQCPPHVTGPRCEEEVVSQQQPGHMASILIPLLLLLLLLLVAGVVFWYKRRV
RGAKGFQHQRMTNGAMNVEIGNPTYKMYEGGEPDDVGGLLDADFALDPDKPTNFTNPVYA
TLYMGGHGSRHSLASTDEKRELLGRGPEDEIGDPLA
Download sequence
Identical sequences ENSOPRP00000012409 ENSOPRP00000012409

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.