SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000012986 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000012986
Domain Number 1 Region: 250-318
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000558
Family Laminin-type module 0.043
Further Details:      
 
Domain Number 2 Region: 432-479
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000162
Family Laminin-type module 0.0076
Further Details:      
 
Domain Number 3 Region: 316-381
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000963
Family Laminin-type module 0.03
Further Details:      
 
Domain Number 4 Region: 535-582
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000012
Family Laminin-type module 0.015
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000012986
Domain Number - Region: 76-170
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000115
Family N-terminal domain of xrcc1 0.054
Further Details:      
 
Domain Number - Region: 482-517
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000218
Family Laminin-type module 0.035
Further Details:      
 
Domain Number - Region: 934-1071
Classification Level Classification E-value
Superfamily Tropomyosin 0.00589
Family Tropomyosin 0.013
Further Details:      
 
Domain Number - Region: 379-406
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0474
Family Laminin-type module 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000012986   Gene: ENSOPRG00000014212   Transcript: ENSOPRT00000014227
Sequence length 1173
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_1446:1658071:1695682:-1 gene:ENSOPRG00000014212 transcript:ENSOPRT00000014227 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRPLLLLCLALPGLLCAQQACSRGACYPPVGDLLIGRTRFLRASSTCGLTKPETYCTQYG
EWQMKCCKCDSRLPHNYNGHRVENVASSSGPTRWWQSQNDVSPVSLQLDLDSRFQLHDIM
MDFKGPMPAGLLIERSSDFGKTWRVYQYLAADCTSAFPRVRQGQPQSWQDIRCQPLPQRP
NGHLNGGKXXXXXXXXXXXXXXXXXXXXXXLGDITNLRVNFTQLAPVPLRGYHPPSAYFA
VSQLRLQGSCFCHGHADRCAPRPGAPAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNR
PWRPAEGQHAHECQRCDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGRNCERCQL
HYFRNRRPGAPIQESCIPCECDPDGAVPGAPCDPATGQCVCREHVXXXXXXXXXXXXXXX
XXXXXXXXXXXCDCSILGARRDMPCDEESGRCLCLPNVVGPKCDQCAPNHWKLASGRGCE
PCACDPRYSLSQQCNQFTGQCPCREGFDGLTCSAAAIRQCPDGTYGDAATGCRACDCDFR
GTEGRGCDRVSGRCLCRPGLTGRRCDQCQRGYCDRHPVCVACHPCFHTYDANLQEQALRL
GSLRNATASLGSRPGLEDQGLASRLLDAKSRMEQIQAVLGGALVSEQDVSQVADGIFSIX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFHTLT
EAYKRSAQAAQRVSDSSSLLSQLRENRRETERLEWQAGSGGAASSPQLEALRLQVAALPD
LTPTINKLCGGSRQTACTPGACPGELCPRDNSTACGSHCTGALPRAGGALRTAGQVAEQL
RRFNAQLQQTRQMIRAAEEAASQVQSDVQRLETQVSISRSQMEEDLSRTRLLIQQVRDFL
ADPDNDAASIQEVSEAVLSLWLPVDSATVLQKMREIQAIVTRLPNVDLVLSQTKQDIERA
RRLQAEAEKARSQAHAVEGQVEDVVGHLRQGTAGLQEAQVTMQGTGRSLRLIQERVAEVQ
QVLGPAETLVTGMTGQLGDFQARIQELRLQAQQQRAQAARAQQLAEGASQQALSAQEGIX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMESELLQGNQA
IVLRSADLAGLEKRVEQIRDHISERVLYYATCK
Download sequence
Identical sequences ENSOPRP00000012986 ENSOPRP00000012986

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]