SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSOPRP00000013536 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000013536
Domain Number 1 Region: 507-665,745-876
Classification Level Classification E-value
Superfamily L domain-like 4.82e-55
Family Ngr ectodomain-like 0.0002
Further Details:      
 
Domain Number 2 Region: 29-249
Classification Level Classification E-value
Superfamily L domain-like 1.43e-47
Family Ngr ectodomain-like 0.00042
Further Details:      
 
Domain Number 3 Region: 1144-1262
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.5e-25
Family Laminin G-like module 0.0044
Further Details:      
 
Domain Number 4 Region: 335-386,428-484
Classification Level Classification E-value
Superfamily L domain-like 0.0000000000141
Family Ngr ectodomain-like 0.0058
Further Details:      
 
Domain Number 5 Region: 917-957
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000671
Family EGF-type module 0.0058
Further Details:      
 
Domain Number 6 Region: 959-1003
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000124
Family EGF-type module 0.008
Further Details:      
 
Domain Number 7 Region: 996-1030
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000223
Family EGF-type module 0.01
Further Details:      
 
Domain Number 8 Region: 1077-1114
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000336
Family EGF-type module 0.025
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000013536
Domain Number - Region: 1412-1449
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00271
Family EGF-type module 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000013536   Gene: ENSOPRG00000014792   Transcript: ENSOPRT00000014822
Sequence length 1449
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_4869:55581:237335:-1 gene:ENSOPRG00000014792 transcript:ENSOPRT00000014822 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MALTARSGSRLELWLLLLWTAAWCPGALACPALCTCTGTTVDCHGMGLQAVPKNIPRSTE
RLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHVL
PELLFQNNQALSRLDLSENAIQSIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLE
VLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPSIGLFTQCTG
PASLRGLNVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSNNHIAEMAPDAFQGLRSLNSLVL
YGNKITDLPRVFAGLYTLQLLLLMHKINCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFR
CSAKEQYFIPGTEDYQLNSECSSDVVCPHKCRCEAGIVECASLKLTKIPERTPQSTAELR
LNNNEISIIEATGMFKKLAHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRS
GMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTL
NLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEEG
GCLPRPQCPQECACLDTVVRCSNKHLRTLPRGIPKNVTELYLDGNQFTQVPGQLSTFKYL
QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALKCIPLLAFQGLRSLRLLSLHGNDVST
LQEGTFTDVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCTGPPDMEGKLLLT
TPAKKFECQGPPTLAIQAKCDPCLSNPCQNQGTCHNDVLEGYGCACPSGYKGRDCEVSLD
SCSSSPCGNGGTCLTQEDEDAGFTCSCPIGFEGPTCGVNIDDCVEHACANGGICVDGVGN
YTCQCPLQYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKKEKGYTGDNCSENQDD
CGDHRCQNGAQCVDEVNIYTHLGGEGYSGQLCEIPPRLPVSKNLCEGTECQNGANCVDQG
SRPVCQCLPGFGGPECEKLLGVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILLYN
GDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSIDGGS
PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
VHGKSIRLDALSYSCQCQERYSGALCTQTGVPAEPCGGLQCLHGHCQASASKGAHCVCDS
GFAGKLCDQ
Download sequence
Identical sequences ENSOPRP00000013536 ENSOPRP00000013536

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