SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000013812 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSOPRP00000013812
Domain Number - Region: 73-222
Classification Level Classification E-value
Superfamily Tropomyosin 0.0582
Family Tropomyosin 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000013812   Gene: ENSOPRG00000015118   Transcript: ENSOPRT00000015122
Sequence length 495
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_3716:59143:116242:1 gene:ENSOPRG00000015118 transcript:ENSOPRT00000015122 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAASVSATSDSQFSXXXXXXXXXXXXXXXRSSSAYVVYPPDKPFLNSDLRRSPNKPTFA
YPESNSRAIFSALKNLQDKIRRLELERIQAEESVKTLSKETIEYKKVLDEQIQERENSKN
QESKHNQELTSQLLAAENKCNLLEKQLEYMRNMIKHAEMERTSVLEKQVSLERERQHDQT
HVQSQLEKLDLLEQEYNKLTTMQALAEKKMQELEAKLHEEEQERKXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSPS
HAVVANVQHVLHLLKQHSKGLCNDRVVNSVPLVKQMSPRGIRSKKSPLPSCSIHELSEVL
QTLQDEFGMSFDHQQLAKLIQESPTAQLKDNLECELEALVGRMEAKANQITKVRKYQAQV
EKQKTEKQKKELRSTKKTLEEDGSSSNRTGITGNTNKKDYTKLRPGEKSRKNLQLLKDMQ
TIQNSLQSGDLCWDY
Download sequence
Identical sequences ENSOPRP00000013812 ENSOPRP00000013812

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]