SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSOPRP00000014394 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000014394
Domain Number 1 Region: 349-401
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000151
Family Laminin-type module 0.046
Further Details:      
 
Domain Number 2 Region: 990-1041
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000391
Family Laminin-type module 0.003
Further Details:      
 
Domain Number 3 Region: 285-351
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000753
Family Laminin-type module 0.034
Further Details:      
 
Domain Number 4 Region: 472-526
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000117
Family Laminin-type module 0.008
Further Details:      
 
Domain Number 5 Region: 434-474
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000148
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 6 Region: 1146-1193
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000781
Family Laminin-type module 0.017
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000014394
Domain Number - Region: 1111-1140
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00112
Family Laminin-type module 0.048
Further Details:      
 
Domain Number - Region: 1257-1323
Classification Level Classification E-value
Superfamily Tropomyosin 0.00785
Family Tropomyosin 0.0064
Further Details:      
 
Domain Number - Region: 968-992
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0232
Family Laminin-type module 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000014394   Gene: ENSOPRG00000015741   Transcript: ENSOPRT00000015756
Sequence length 1545
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_641:92179:189910:-1 gene:ENSOPRG00000015741 transcript:ENSOPRT00000015756 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GDHLLVVLSWAQAIVPPTPLYPAPLAALCRVQVDAQEPEFSYGCAEGSCYPATGDLLIGR
SQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDSQDPYHETLNPDSHLIENVVTTFAPN
RLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWGVYRYF
AYDCESSFPGVSTGPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQN
LLKITNLRIKFVKLHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGF
NEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHF
DMAVYLATGNVSGGVCDECQHNTMGRNCEQCRPFYYQHPERDIRDPNVCEQCSCDPAGSQ
NEGICDSYTDFAAGLIAGQCRCKPYVEGEHCDVCKEGFYGLSATDPFGCQSCACNPLGTI
PGGNPCDSETGYCYCKRLVMGQRCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDHWEKAVITVQRPGKIPASSRCGNT
VPDDDNQVVSLSPGSRYVVLPRPVCFEKDMNYTVRLELPQYTSSDSGVDSPYTLIDSXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXSRCDDCASGYFGNPSDVGGSCQPCQCHHNIDTTDPEACDKETGQCLKCLYHTEG
DHCELCRFGYYGDALRQDCRKCVCNYLGTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTGQCQCMPGFGGRTCSECQELFWGDPD
VECRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPSCTPCHQCFALW
DVIISELTNKTHRFLERAKALKISGVIGPYRETVDSIEKKVNDIKDILAQSPAAEPLKNI
GNLFEEAEKLSKDVTEKMAQLEVKLSDTAEQSNSTTRELDSLQAEAESLGNTVKELAEQL
EFIKNSDIRGALDSINKYFQMSLEAEEKVNASTTDPNSTVEQSALIRERVEDLMMYQQSP
FRENQETPPLLLYELQAKLQSLALSAAAEMTCGTPPGASCSETECGGPNCRTDDGEKKCG
GPGCGGLVTVAHNAWQKAMDFDQEVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKT
NATKEKVDKSNEDLRNLIKQIRDFLTQDSADLDSIEAVANEVLKM
Download sequence
Identical sequences ENSOPRP00000014394 ENSOPRP00000014394

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