SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000001644 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000001644
Domain Number 1 Region: 249-548
Classification Level Classification E-value
Superfamily Sema domain 2.88e-83
Family Sema domain 0.0000000801
Further Details:      
 
Domain Number 2 Region: 30-150
Classification Level Classification E-value
Superfamily Sema domain 6.41e-33
Family Sema domain 0.0000523
Further Details:      
 
Domain Number 3 Region: 544-595
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000471
Family Plexin repeat 0.0021
Further Details:      
 
Domain Number 4 Region: 611-692
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000218
Family I set domains 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000001644   Gene: ENSOPRG00000001764   Transcript: ENSOPRT00000001782
Sequence length 783
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_426:17688:155792:-1 gene:ENSOPRG00000001764 transcript:ENSOPRT00000001782 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAFRGFCLVVGVFIYSISVNGSSQPQARVYLTFDELRETKTAEYFSLSSLPLDYRILLMD
EDQDRIYVGSKDHILSLNINNISQEPLSVFWPASAIKVEECKMAGKDPTHGCGNFVRVIQ
TFNRTHLYVCGSGAFSPVCTYLNRGRRSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXPMFVDAHVIPDGTDPNDAKVYFFFKEKLTDNNRSTKQIHSMIARICPND
TGGLRSLVNKWTTFLKARLVCSVTDEDGPETHFDELXXXXXXXXXXXXXXXXXXXXXXXX
SVFKGSAVCVYHFSDIQTVFNGPFAHKEGPNHQLISYQGRIPYPRPGTCPGGAFTPNMRS
TKEFPDDVVTFIRNHPLMYNSIYPIHRRPLIVRIGTDYKYTKXXXXXXXXXXXXXXXXXX
XXXRGTVQKVVVLPTNNSANGELILEELEVFKNRVPITTMKISSKKQQLYVSSNEGISQV
SLHRCHIYGTACADCCLARDPYCAWDGKSCSRFYPTGKRRSRRQDVRHGNPLTQCRGFNL
KEYRNAAEIVQYGVKNNTTFLECAPKSPQASIKWLLQKDKDRRKEVKLNERIIATSQGLL
IRSVQDSDQGLYHCIATENSFKQTIAKINFKVLDSETVAVVTEKWSPWTWASSMRALPFH
PKDIMGAFSHSEMQMINQYCKDTRSQHHHHGEETQRMRGDYGKLKALISSRKSRNRRNQL
PES
Download sequence
Identical sequences ENSOPRP00000001644 ENSOPRP00000001644

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]