SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOPRP00000004596 from Ochotona princeps 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOPRP00000004596
Domain Number 1 Region: 204-246
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000191
Family EGF-type module 0.0091
Further Details:      
 
Domain Number 2 Region: 162-194
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000294
Family EGF-type module 0.021
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000004596
Domain Number - Region: 690-824
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.00054
Family Rhodopsin-like 0.034
Further Details:      
 
Domain Number - Region: 29-51
Classification Level Classification E-value
Superfamily EGF/Laminin 0.065
Family EGF-type module 0.065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000004596   Gene: ENSOPRG00000004972   Transcript: ENSOPRT00000004998
Sequence length 834
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_1669:11502:24220:1 gene:ENSOPRG00000004972 transcript:ENSOPRT00000004998 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RPGRVLLVLWVVLTALGAAAQKPQACAPWCPKNSMCVNASACRCNPGFKALSGDVFTDPT
DTCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNECTWKPGPCHSSTHCIN
KAGGYVCRCRPGWEPVPGSPNGPNNTICQDVNECSSGQHQCHNSTVCHNTIGAYKCYCRP
GWELMPGFPNGSINTVCQDILSNWTLPPGVHSLALSQFLDRVQALSRDFKTTSAKDTIQN
LIQLTDELLGAPGDLQQLAQSDQHRVATQMLSGLEQSLRMLAKTLSVGPFMYRSHLGTEL
SLVVAKKEAEGNITIGQSHARVLLDWAVASEEGDSGNKVAGILSSPHMNKTLLASASLVL
EPKERTELEAAHEIPLRGARPQLLSAVSSVFVSNRKTERLSSPVTFAFSHLEPGGLKEPP
VHPQTPGPRQKLICAFWKNDSQGRGHWATTGCRKLGSQNGSVTCQCDHLSSFAVLMAHFD
FEDPKLALVTKVGLSLSLVCLLLCILTFLLVRSIQGSRTTVHLHLCVCLFVGSAIFLAGI
ENEGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXWVNPEPLFLNLLGPVTATVLCNAVVFVITVWRLTQKFS
EINPDMKKLKKARVLTVTAIAQLFVLGCTWVFGLFLFQPQSWHNQVLAYTFTALNCLQGL
FLFALHCLLNKKVREEYRKWACIVAGNKYSEFASSSTATSHQSSRVPRPSESGM
Download sequence
Identical sequences ENSOPRP00000004596 ENSOPRP00000004596

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]