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  Home > Genomes > Ochotona princeps 76 > ENSOPRP00000012900

Domain assignment for ENSOPRP00000012900 from Ochotona princeps 76

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000012900
Domain Number 1 Region: 396-449
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000589
Family TSP-1 type 1 repeat 0.0008
Further Details:      
 
Domain Number 2 Region: 291-334
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000085
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Domain Number 3 Region: 449-504
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000314
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Weak hits

Sequence:  ENSOPRP00000012900
Domain Number - Region: 45-120
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00568
Family Spermadhesin, CUB domain 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOPRP00000012900   Gene: ENSOPRG00000014096   Transcript: ENSOPRT00000014137
Sequence length 1519
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2178:27143:531531:1 gene:ENSOPRG00000014096 transcript:ENSOPRT00000014137 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLE
NPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHKIKDLLRKNHSIMLCSKNAFVFLQY
DKNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQWSTC
SVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGQWQEWSSWSQCSVTCSNGTQQR
SRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRIRTCQ
GAAITGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLMSMVWKRTPAGDLAFNQCPLNATG
TTSRRCSLSLHGVAFWEQPSFARCISNEYRHLQHSXXXXXXXXXXXXXXXXXXXXXXXXX
XLTQRKNLYAGDLLISVEILRNVTDTFKRASHISASDGVHXXXXXXXXXXXXXXXXXXXX
XXXIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGAVLYKNLDLILPTLRNYTVV
NSKIIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKTNESLGTWSTQGCKTVL
TDASHTKCLCDRLSTFAILAQQPREIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSICTTTTAFLHFFFLASFCWVLTEA
WQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLY
AFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVI
VMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVLHKD
IGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPMSMN
ELSNQCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVNTQPSMK
EESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTA
VKNFMASELDDNAGLSRSETGSTISMSSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXENPAPNKNPWDTFKNPSDYQHYTTVNVLDTEAKDTLELRPAEW
EKCLNLPLDVQEGDFQTEV
Download sequence
Identical sequences ENSOPRP00000012900 ENSOPRP00000012900

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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